Error in xtfrm.data.frame(x) : cannot xtfrm data frames

[zaozaozaonan]

I've encountered the bug listed below. Is there any idea what's going wrong?

Run scStatistics

stat.results <- runScStatistics(
dataPath = paste0(dataPath),
savePath = savePath,
sampleName = sampleName,
authorName = authorName
)

[2025-07-15 22:35:44.65818] START: RUN scStatistics
[2025-07-15 22:35:44.685246] -----: data preparation
[2025-07-15 22:36:24.396428] -----: cell calling
Error in xtfrm.data.frame(x) : cannot xtfrm data frames

[zhangj1115]

me too, i use the example data
rm(list=ls())
library(scCancer)

dataPath <- "./KC-example/" # The path of cell ranger processed data
savePath <- "./KC-example/" # A path to save the results
sampleName <- "KC-example" # The sample name
authorName <- "G-Lab@THU" # The author name to mark the report

Run scStatistics

stat.results <- runScStatistics(
dataPath = dataPath,
savePath = savePath,
sampleName = sampleName,
authorName = authorName
)
error：
[ 2025-09-13 21:51:31.698279 ] START: RUN scStatistics
[ 2025-09-13 21:51:31.698705 ] -----: data preparation
[ 2025-09-13 21:51:57.693377 ] -----: cell calling
Error in xtfrm.data.frame(x) : cannot xtfrm data frames