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Releases: yhoogstrate/fuma

v2.12.2

16 Mar 09:31
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  • Removal of unused 'sequence' and 'transition sequence' variables within the Fusion object, to reduce memory.

v2.12.1

15 Mar 09:53
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  • Another reuction of memory footprint - from linear scale (as the number of samples increase) to chunk-wise
  • Changed verbosity settings, requires the --verbose argument to get a detailed output.

v2.12.0

14 Mar 11:15
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  • Huge reduction of memory footprint: from exponential to linear scale as the number of samples increase. Also the pruning system works very efficient and the memory does not increase too much after a large number of iterations with many samples. (Solves #26)

v2.11.8

14 Mar 10:07
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  • Reduction of memory footprint

v2.11.7

14 Mar 08:44
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  • Reduction of memory footprint

v2.11.6

11 Mar 13:58
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  • Support for JAFFA

v2.11.5

11 Mar 11:37
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  • Added utility to create appropriate BED files from GTF files

v2.11.4

11 Mar 09:46
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  • More efficient with memory for a large number of samples (still not super efficient)

v2.11.3

08 Feb 08:33
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  • Fixes support for EricScript (#14)
  • Addresses an installation issue with numpy (#8)
  • More convenient way of throwing exceptions if files are being parsed improperly

v2.11.2

07 Feb 20:00
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  • Support for SOAPFuse and EricScript