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README.Rmd
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README.Rmd
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---
output: github_document
---
<!-- README.md is generated from README.Rmd. Please edit that file -->
```{r, echo = FALSE}
knitr::opts_chunk$set(
collapse = TRUE,
comment = "#>",
fig.path = "README-"
)
```
# gen5helper
A Collection of Functions for Processing Gen5 2.06 Exported Data
## Installation
You can install gen5helper from github with:
```{r gh-installation, eval = FALSE}
# install.packages("devtools")
devtools::install_github("yanxianucsb/gen5helper")
```
## Example
After exporting tab-delim ascii files (named 'data.txt' for instance), this is
a basic example for further cleaning and annotating:
```{r example, eval=FALSE}
## clean
df <- g5h.clean('data.txt')
## add time intervals
df <- g5h.set_time(df)
## add mean, standard deviation, treatment and dose.
df <- g5h.annotate(df)
```