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DESCRIPTION
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DESCRIPTION
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Package: HTSet
Type: Package
Title: High through-put experiment dataset container
Version: 0.1.0
Author: Chenghao Zhu
Maintainer: Chenghao Zhu <[email protected]>
Description: This package defines a S4 data container for quantitative high
though-put experiment data, such as RNA-seq, proteomics, and metabolomics, for
data analysis, statistic test, and visualization.
Depends: R (>= 3.1.0)
License: MIT + file LICENSE
Encoding: UTF-8
LazyData: true
Collate:
HTSet-class.R
HTSet-methods.R
HTSet-accessors.R
data.R
lipidome-summarize.R
model_fit.R
enrichment.R
plot.R
Imports:
methods,
utils,
magrittr,
dplyr,
reshape2,
stringr,
crayon,
ggplot2,
cowplot
Suggests:
testthat (>= 2.1.0),
knitr,
rmarkdown,
limma,
edgeR,
DESeq2,
covr
RoxygenNote: 7.0.2
VignetteBuilder: knitr