Playing with pages

docs/404.html

@@ -0,0 +1,24 @@
+---
+layout: default
+---
+
+<style type="text/css" media="screen">
+  .container {
+    margin: 10px auto;
+    max-width: 600px;
+    text-align: center;
+  }
+  h1 {
+    margin: 30px 0;
+    font-size: 4em;
+    line-height: 1;
+    letter-spacing: -1px;
+  }
+</style>
+
+<div class="container">
+  <h1>404</h1>
+
+  <p><strong>Page not found :(</strong></p>
+  <p>The requested page could not be found.</p>
+</div>

docs/Gemfile

@@ -0,0 +1,33 @@
+source "https://rubygems.org"
+
+# Hello! This is where you manage which Jekyll version is used to run.
+# When you want to use a different version, change it below, save the
+# file and run `bundle install`. Run Jekyll with `bundle exec`, like so:
+#
+#     bundle exec jekyll serve
+#
+# This will help ensure the proper Jekyll version is running.
+# Happy Jekylling!
+#gem "jekyll", "~> 3.8.6"
+
+# This is the default theme for new Jekyll sites. You may change this to anything you like.
+gem "minima", "~> 2.0"
+
+# If you want to use GitHub Pages, remove the "gem "jekyll"" above and
+# uncomment the line below. To upgrade, run `bundle update github-pages`.
+gem "github-pages", group: :jekyll_plugins
+
+# If you have any plugins, put them here!
+group :jekyll_plugins do
+  gem "jekyll-feed", "~> 0.6"
+end
+
+# Windows does not include zoneinfo files, so bundle the tzinfo-data gem
+# and associated library.
+install_if -> { RUBY_PLATFORM =~ %r!mingw|mswin|java! } do
+  gem "tzinfo", "~> 1.2"
+  gem "tzinfo-data"
+end
+
+# Performance-booster for watching directories on Windows
+gem "wdm", "~> 0.1.0", :install_if => Gem.win_platform?

docs/README.md

@@ -1,3 +1,6 @@
+---
+layout: home
+---
 # morphologica
 
 ![A banner image of a hexgrid surface plot](https://github.com/ABRG-Models/morphologica/blob/main/examples/screenshots/banner.png?raw=true)

docs/_config.yml

@@ -1,3 +1,28 @@
-theme: jekyll-theme-minimal
-title: morphologica
-description: Reference material on using morphologica classes.
+title: morphologica OpenGL data visualization
+email: [email protected]
+description: >- # this means to ignore newlines until "baseurl:"
+  Learn how to use morphologica C++ classes to write fast numerical simulations
+  with amazing OpenGL visualization
+#baseurl: "" # the subpath of your site, e.g. /blog
+#url: "" # the base hostname & protocol for your site, e.g. http://example.com
+#twitter_username:
+github_username:  sebjameswml
+
+# Build settings
+#markdown: kramdown
+theme: minima
+#theme: jekyll-theme-minimal
+plugins:
+  - jekyll-feed
+
+# Exclude from processing.
+# The following items will not be processed, by default. Create a custom list
+# to override the default setting.
+# exclude:
+#   - Gemfile
+#   - Gemfile.lock
+#   - node_modules
+#   - vendor/bundle/
+#   - vendor/cache/
+#   - vendor/gems/
+#   - vendor/ruby/

docs/about.md

@@ -0,0 +1,18 @@
+---
+layout: page
+title: About
+permalink: /about/
+---
+
+This is the base Jekyll theme. You can find out more info about customizing your Jekyll theme, as well as basic Jekyll usage documentation at [jekyllrb.com](https://jekyllrb.com/)
+
+You can find the source code for Minima at GitHub:
+[jekyll][jekyll-organization] /
+[minima](https://github.com/jekyll/minima)
+
+You can find the source code for Jekyll at GitHub:
+[jekyll][jekyll-organization] /
+[jekyll](https://github.com/jekyll/jekyll)
+
+
+[jekyll-organization]: https://github.com/jekyll

tests/testRandom.cpp

@@ -19,7 +19,7 @@ int main()
     morph::RandUniform<SMALL_T, std::mt19937> rui;
     cout << "Random number is " << static_cast<unsigned int>(rui.get()) << endl;
     // You can find the min and max:
-    cout << "That integer RNG has min and max: " << static_cast<unsigned int>(rui.min())
+    cout << "That integer unsigned char (or short on Windows) RNG has min and max: " << static_cast<unsigned int>(rui.min())
          << "/" << static_cast<unsigned int>(rui.max()) << endl;
 
     // A random uniform generator returning real/floating point types
@@ -40,56 +40,56 @@ int main()
     // numbers before a repeat.
     morph::RandUniform<unsigned int, std::mt19937_64> rubnd (0, 3);
     // You can find the min and max:
-    cout << "That bounded, integer RNG has min and max: " << rubnd.min() << "/" << rubnd.max() << endl;
-    cout << "Ten random numbers in that range:\n";
+    cout << "That bounded, unsigned integer RNG has min and max: " << rubnd.min() << "/" << rubnd.max() << endl;
+    cout << "Ten random unsigned int numbers in that range:\n";
     vector<unsigned int> tenrns2 = rubnd.get(10);
     for (auto d : tenrns2) { cout << d << endl; }
 
     // There is an overload of get which fills a fixed size array that you pass it with random numbers
     std::array<unsigned int, 12> twelverns;
     rubnd.get(twelverns);
-    cout << "Twelve random numbers in an array:\n";
+    cout << "Twelve random unsigned int numbers in an array:\n";
     for (auto d : twelverns) { cout << d << endl; }
 
 
     // Similar for float
     morph::RandUniform<float, std::mt19937> rubndf (0.0f, 1000.0f, 1);
     // You can find the min and max:
     cout << "FIXED SEED: bounded, float RNG has min and max: " << rubndf.min() << "/" << rubndf.max() << endl;
-    cout << "Ten random numbers in that range:\n";
+    cout << "Ten random float numbers in that range:\n";
     vector<float> tenrns3 = rubndf.get(10);
     for (auto d : tenrns3) { cout << d << endl; }
 
     // Another with seed 1 for float
     morph::RandUniform<float, std::mt19937> rubndf2 (0.0f, 1000.0f, 1);
-    cout << "Ten random numbers in that range from second rng with seed 1:\n";
+    cout << "Ten random float numbers in that range from second rng with seed 1:\n";
     vector<float> tenrns32 = rubndf2.get(10);
     for (auto d : tenrns32) { cout << d << endl; }
 
     // Test two rng generators where no seed is specified
     morph::RandUniform<float, std::mt19937> rubndf3 (0.0f, 1000.0f);
-    cout << "Ten random numbers from the first 'default seed rng':\n";
+    cout << "Ten random float numbers from the first 'default seed rng':\n";
     vector<float> tenrns33 = rubndf3.get(10);
     for (auto d : tenrns33) { cout << d << endl; }
     morph::RandUniform<float, std::mt19937> rubndf4 (0.0f, 1000.0f);
-    cout << "Ten random numbers from the second 'default seed rng':\n";
+    cout << "Ten random float numbers from the second 'default seed rng':\n";
     vector<float> tenrns34 = rubndf4.get(10);
     for (auto d : tenrns34) { cout << d << endl; }
 
     // Normally distributed numbers:
     morph::RandNormal<double, std::mt19937_64> rnorm (5, 0.1);
     vector<double> tennorms = rnorm.get(10);
-    cout << "10 normals:" << endl;
+    cout << "10 random normals (double type):" << endl;
     for (auto d : tennorms) { cout << d << endl; }
 
     morph::RandLogNormal<double, std::mt19937_64> rln (5, 0.1);
     vector<double> tenlnorms = rln.get(10);
-    cout << "10 log normals:" << endl;
+    cout << "10 log normals (double type):" << endl;
     for (auto d : tenlnorms) { cout << d << endl; }
 
     morph::RandPoisson<int, std::mt19937> rpois (5);
     vector<int> tenpois = rpois.get(10);
-    cout << "10 Poisson RNs:" << endl;
+    cout << "10 Poisson RNs (int type):" << endl;
     for (auto d : tenpois) { cout << d << endl; }
 
     return rtn;