Merge pull request #764 from ACCESS-NRI/development

Update main website with latest content
ACCESS-NRI · Aug 30, 2024 · 0948738 · 0948738
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diff --git a/README.md b/README.md
@@ -1,5 +1,5 @@
 # ACCESS-Hive Docs
-[![ACCESS-Hive Docs Badge](docs/assets/badge_hive_docs.svg)][hive-docs-website]
+[![ACCESS-Hive Docs Badge](docs/assets/assets_for_readme/badge_hive_docs.svg)][hive-docs-website]
 [![github-contributors](https://img.shields.io/github/contributors/ACCESS-NRI/access-hive.org.au?color=blue&style=plastic)][github-repo]
 [![forum-users](https://img.shields.io/discourse/users?color=blue&label=forum&server=https%3A%2F%2Fforum.access-hive.org.au&style=plastic)][forum]
 [![link-check](https://github.com/ACCESS-NRI/access-hive.org.au/actions/workflows/link_check.yml/badge.svg)](https://github.com/ACCESS-NRI/access-hive.org.au/actions/workflows/link_check.yml)

diff --git a/docs/assets/ACCESS_NRI_full_logo.png b/docs/assets/ACCESS_NRI_full_logo.png
diff --git a/docs/assets/ACCESS_logo_rgb.png b/docs/assets/ACCESS_logo_rgb.png
diff --git a/docs/assets/access_logo_rgb.svg b/docs/assets/access_logo_rgb.svg
diff --git a/docs/assets/badge_hive_docs.svg → ...ets/assets_for_readme/badge_hive_docs.svg b/docs/assets/badge_hive_docs.svg → ...ets/assets_for_readme/badge_hive_docs.svg
diff --git a/docs/assets/workshop_and_events.jpeg b/docs/assets/workshop_and_events.jpeg
diff --git a/docs/community_resources/access_workshop_2024/index.md b/docs/community_resources/access_workshop_2024/index.md
@@ -1,6 +1,10 @@
-# ACCESS Training Day (2 Sept)
+# ACCESS Training Day 
 
-To find out detailed information about the workshop schedule, check the [ACCESS Community Workshop 2024 page](https://www.access-nri.org.au/access-community-workshop-2024/) on the ACCESS-NRI website. This section includes [training materials](community_resources/training_materials.md) for hands-on exercises during the workshop.
+**Time:** 9am - 5pm on Monday, 2 September 2024
+
+**Location:** Marie Reay Teaching Centre, Level 5 (on the ANU campus)
+
+Setup requirements can be found on the Training Materials page linked below.
 
 <div class="card-container workshop-page">
     <a href="https://www.access-nri.org.au/wp-content/uploads/2024/08/Schedule_and_session_details_with_hackathon.pdf" class="horizontal-card" target="_blank">
@@ -30,4 +34,4 @@ To find out detailed information about the workshop schedule, check the [ACCESS
             <span class="bold" >Main Workshop Program<br>(3-5 Sep 2024)</span>
         </div>
     </a>
-</div>
+</div>
diff --git a/docs/community_resources/access_workshop_2024/training_materials.md b/docs/community_resources/access_workshop_2024/training_materials.md
@@ -1 +1,81 @@
-Training Materials (ACCESS Workshop 2024) 
+Links to other materials will be added here soon!
+
+
+
+## Setup requirements
+
+**To be completed *BEFORE* arrival Monday morning. Note that NCI project approvals can only be done during business hours (not on weekends).**
+
+### Morning Sessions Setup Requirements 
+Setup instructions for each step can be found at the links provided. Note that many sessions have the same requirements – you need only complete each step once. 
+
+#### How to find and access datasets on NCI & handle large model output   
+
+- [NCI account](https://access-hive.org.au/getting_started/set_up_nci_account/#create-an-nci-user-account)
+
+- [NCI project memberships](https://access-hive.org.au/getting_started/set_up_nci_account/#join-relevant-nci-projects):
+    - [nf33](https://my.nci.org.au/mancini/project/nf33), [xp65](https://my.nci.org.au/mancini/project/xp65), [hh5](https://my.nci.org.au/mancini/project/hh5), [dk92](https://my.nci.org.au/mancini/project/dk92), [fs38](https://my.nci.org.au/mancini/project/fs38), [p73](https://my.nci.org.au/mancini/project/p73), [ik11](https://my.nci.org.au/mancini/project/ik11), [oi10](https://my.nci.org.au/mancini/project/oi10) 
+
+- It is useful to have [logged on to Gadi and set up an SSH key](https://access-hive.org.au/getting_started/set_up_nci_account/#login-to-gadi) before, but it is not essential to participate in this session. 
+
+
+#### Advanced git & GitHub best practices for software developers 
+
+- [GitHub account](https://github.com)
+
+- [Git installed on your laptop](https://github.com/git-guides/install-git)
+
+### Afternoon Sessions Setup Requirements 
+Setup instructions for each step can be found at the links provided. 
+
+#### Running model experiments with Payu and Git 
+
+- [NCI account](https://access-hive.org.au/getting_started/set_up_nci_account/#create-an-nci-user-account)
+
+- [NCI project memberships](https://access-hive.org.au/getting_started/set_up_nci_account/#join-relevant-nci-projects):
+    - [nf33](https://my.nci.org.au/mancini/project/nf33), [vk83](https://my.nci.org.au/mancini/project/vk83) 
+
+- [GitHub account](https://github.com)
+
+In this session, you will have the option to run OM2 or ESM1.5 with Payu. Note that only those with MOSRS accounts (or those who requested one recently) will be able to run ESM1.5. 
+
+#### Running a high-resolution regional model using a two-level nest    
+
+- [NCI account](https://access-hive.org.au/getting_started/set_up_nci_account/#create-an-nci-user-account)
+
+- [NCI project memberships](https://access-hive.org.au/getting_started/set_up_nci_account/#join-relevant-nci-projects):
+    - [nf33](https://my.nci.org.au/mancini/project/nf33), [hr22](https://my.nci.org.au/mancini/project/hr22), [ki32](https://my.nci.org.au/mancini/project/ki32), [kit32_mosrs](https://my.nci.org.au/mancini/project/kit32_mosrs), [rt52](https://my.nci.org.au/mancini/project/rt52), [hh5](https://my.nci.org.au/mancini/project/hh5), [zz93](https://my.nci.org.au/mancini/project/zz93), [ob53](https://my.nci.org.au/mancini/project/ob53)
+
+- MOSRS account 
+
+  - A request has been made on your behalf to get a MOSRS account if you registered for this session. Once this has been done, you will receive an email and will need to follow the instructions in the email to finish setting up your account. You are all set if you have registered, as an account application has been made for you, and you will be able to attend the session (provided you finish the other setup requirements above). **Note: you cannot attend this session did not register for this session (unless you already have a MOSRS account).**
+
+#### CMIP7 Evaluation Hackathon Setup Requirements 
+[Link to CMIP7 Evaluation Hackathon website](https://access-nri.github.io/CMIP7_MED_Hackathon/index.html)
+All setup instructions can be found [at this link](https://access-nri.github.io/CMIP7_MED_Hackathon/setup.html). A summary of the steps is provided below. 
+
+- [NCI account](https://access-hive.org.au/getting_started/set_up_nci_account/#create-an-nci-user-account)
+
+- [NCI project memberships](https://access-hive.org.au/getting_started/set_up_nci_account/#join-relevant-nci-projects):
+    - [nf33](https://my.nci.org.au/mancini/project/nf33), [zv30](https://my.nci.org.au/mancini/project/zv30), [xp65](https://my.nci.org.au/mancini/project/xp65), [ct11](https://my.nci.org.au/mancini/project/ct11), [fs38](https://my.nci.org.au/mancini/project/fs38), [oi10](https://my.nci.org.au/mancini/project/oi10), [rr3](https://my.nci.org.au/mancini/project/rr3), [al33](https://my.nci.org.au/mancini/project/al33), [rt52](https://my.nci.org.au/mancini/project/rt52), [zz93](https://my.nci.org.au/mancini/project/zz93)
+
+- Set up your  to run ESMValTool 
+
+- Download and set up Visual Studio Code (VS Code) to connect to NCI’s Gadi 
+
+_Note: The hackathon is a full day session. If you only plan to join in the afternoon, you will miss some introductory information and may find it more difficult to follow along._
+
+
+### Not sure which sessions you signed up for? 
+You can find this information by viewing your Eventbrite ticket, which you can find linked in an email with subject “Order Confirmation for ACCESS Training Day 2024”. 
+
+### How do I know when my NCI project membership has been approved? 
+You should receive automated emails from NCI as your memberships are approved. You can also check on the status of your project memberships by logging into MyNCI.  
+
+### Wondering why you have to join so many NCI projects? 
+NCI compute and storage space is organized into projects. In order to get access to our Training Day compute resources, you will need access to project nf33. Most of the other projects listed above are for accessing datasets and/or software tools that are stored at NCI in specific projects. For instance, oi10 and fs38 house CMIP6 datasets. 
+
+### Training Day program and other information 
+- [Link to Training Day information on the ACCESS-NRI website](https://www.access-nri.org.au/event/access-training-day-2-september-2024/)
+- [Link to Training Day schedule and session descriptions (PDF)](https://www.access-nri.org.au/wp-content/uploads/2024/07/Schedule_and_session_details.pdf) 
+
diff --git a/docs/community_resources/index.md b/docs/community_resources/index.md
@@ -4,7 +4,7 @@
     <!-- TEMPORARY for Workshop -->
     <a href="/community_resources/workshops_events_archive" class="vertical-card aspect-ratio1to1">
         <div class="card-image-container">
-            <img class="img-contain white-background" src="/assets/ACCESS_logo_rgb.png" alt="ACCESS Workshop 2023">
+            <img class="white-background" src="/assets/workshop_and_events.jpeg" alt="ACCESS Workshop 2023">
         </div>
         <div class="card-text-container bold">Workshops and Events Archive</div>
     </a>

diff --git a/docs/css/access-nri.css b/docs/css/access-nri.css
@@ -223,6 +223,8 @@
   width: clamp(100px,30%,250px);
   min-height: 0;
   container-type: inline-size;
+  padding: 0.4rem;
+  gap: 0.2rem;
 }
 
 .horizontal-card {
@@ -232,6 +234,8 @@
   align-items: stretch;
   width: 100%;
   height: 8rem;
+  padding: 0.4rem;
+  gap: 0.2rem;
 }
 
 .card-text-container {
@@ -258,23 +262,19 @@
 
 .vertical-card > .card-image-container {
   flex-basis: 70%;
-  padding: 3.5%;
 }
 .vertical-card > .card-text-container {
   height: 30%;
   flex-grow: 0;
   flex-shrink: 0;
   font-size: 10cqi;
-  padding: 3.5%;
 }
 
 .horizontal-card > .card-image-container {
   flex-basis: 25%;
-  padding: 0.4rem;
 }
 .horizontal-card > .card-text-container {
   flex-basis: 75%;
-  padding: 0.4rem;
 }
 
 .card-image-container > img {
@@ -283,13 +283,6 @@
   border-radius: 0.35rem;
 }
 
-.vertical-card > .card-text-container:last-child {
-  padding-top: 0;
-}
-.vertical-card > .card-text-container:first-child {
-  padding-bottom: 0;
-}
-
 .horizontal-card > .card-text-container > *:first-child:not(:only-child) {
   margin-bottom: 0.5em;
 }
@@ -421,7 +414,6 @@ h1.homepage {
 .homepage-buttons .card-text-container {
   height: 1.8em;
   font-size: 2em;
-  padding: 2.5%;
 }
 
 /* Navigation cards in homepage */
@@ -1326,9 +1318,6 @@ img.intro-img {
     height: 8vw;
     border-radius: 2vw;
   }
-  .homepage-buttons .card-text-container {
-    padding: 0;
-  }
 }
 
 
@@ -1358,13 +1347,6 @@ img.intro-img {
     flex: 0 0 auto;
     font-size: 10cqi;
     font-weight: 600;
-    padding: 3.5%;
-  }
-  .horizontal-card > .card-image-container {
-    padding: 3.5%;
-  }
-  .horizontal-card > .card-text-container:last-child {
-    padding-top: 0;
   }
   .horizontal-card > .card-text-container > *:last-child:not(:only-child) {
     display: none;
@@ -1460,7 +1442,6 @@ img.intro-img {
 }
 .card-container.homepage-buttons.workshop .card-text-container {
   height: 100%;
-  padding: 0.4rem 0.4rem 0.4rem 0;
 }
 .card-container.homepage-buttons.workshop .card-text-container > span {
   background-color: var(--nri-orange);
@@ -1494,7 +1475,6 @@ img.intro-img {
   }
   .card-container.homepage-buttons.workshop .card-text-container {
     flex-basis: 100%;
-    padding: 0;
   }
 }
 @media screen and (width <= 550px) {

diff --git a/docs/index.md b/docs/index.md
@@ -9,14 +9,27 @@ hide:
     <div>
         <div>Welcome to ACCESS-Hive Docs!</div>
         <div>
-            Documentation for the ACCESS users: Getting set up, Running models and Model Evaluation
+            Documentation for ACCESS users: getting set up, running models and model evaluation
         </div>
     </div>
     <div>
         <img src="assets/ACCESS_icon_HIVE.png">
     </div>
 </div>
-
+<!-- TEMPORARY for workshop -->
+<div class="card-container homepage-buttons workshop">
+    <a href="/community_resources/access_workshop_2024" class="horizontal-card" style="height: 3rem;">
+        <div class="card-image-container" style="flex-basis: 20%">
+            <img src="/assets/ACCESS_NRI_full_logo.png" class="white-background img-contain"></img>
+        </div>
+        <div class="card-text-container" style="flex-grow: 1;">
+            <span class="bold small-text">
+                ACCESS Training Day and Workshop 2024
+            </span>
+        </div>
+    </a>
+</div>
+<!-- TEMPORARY for workshop -->
 <div class="card-container homepage-buttons">
     <a href="/getting_started" class="vertical-card">
         <div class="bold">New ACCESS user?</div>

diff --git a/docs/model_evaluation/evaluation_on_gadi/model_live_diagnostics.md b/docs/model_evaluation/evaluation_on_gadi/model_live_diagnostics.md
@@ -10,7 +10,7 @@ Below, we show an example of the Model Live Diagnostics Tool. For more informati
 <!-- <div class="card-container">
     <a href="https://med-live-diagnostics.readthedocs.io/en/latest/index.html" class="vertical-card aspect-ratio2to1" target="_blank">
         <div class="card-image-container">
-            <img src="../../../assets/access_logo_rgb.svg" alt="ACCESS-NRI Model Diagnostics Documentation" class="img-contain white-background with-padding"></img>
+            <img src="../../../assets/ACCESS_NRI_full_logo.png" alt="ACCESS-NRI Model Diagnostics Documentation" class="img-contain white-background with-padding"></img>
         </div>
         <div class="card-text-container bold ">Model Diagnostics Documentation</div>
     </a>

diff --git a/docs/model_evaluation/model_diagnostics/index.md b/docs/model_evaluation/model_diagnostics/index.md
@@ -12,7 +12,7 @@ For more information and tutorials, please visit <a href="https://med-live-diagn
 <!-- <div class="card-container">
     <a href="https://med-live-diagnostics.readthedocs.io/en/latest/index.html" class="vertical-card aspect-ratio2to1" target="_blank">
         <div class="card-image-container">
-            <img src="../../../assets/access_logo_rgb.svg" alt="ACCESS-NRI Model Diagnostics Documentation" class="img-contain white-background with-padding"></img>
+            <img src="../../../assets/ACCESS_NRI_full_logo.png" alt="ACCESS-NRI Model Diagnostics Documentation" class="img-contain white-background with-padding"></img>
         </div>
         <div class="card-text-container bold ">Model Diagnostics Documentation</div>
     </a>