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Refactor #92
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…pyproject.toml with dependencies and metadata
- Updated .env.example files across multiple projects to include comprehensive environment configuration details, including Nebius API key instructions and optional settings. - Added pyproject.toml files for modern dependency management in newsletter_agent and crewai_starter projects, ensuring proper project metadata and dependencies are defined. - Created a new QUICKSTART.md guide for the starter_ai_agents category, providing a structured introduction to AI agent development and framework comparisons. - Implemented a PowerShell script for automated documentation improvements, ensuring .env.example files are comprehensive and pyproject.toml files are created where necessary. - Established a GitHub Actions workflow for quality assurance, including documentation checks, dependency analysis, code quality checks, and project structure validation.
…ncluding type hints, logging, error handling, and documentation guidelines.
…, and agent creation process
…jects - Updated CODE_QUALITY_STANDARDS.md to enhance README standardization guidelines. - Enhanced code quality in finance_service_agent by adding type hints, logging, and improved error handling. - Refactored stockNews.py and topStocks.py to include detailed docstrings and structured logging. - Improved main.py in finance_agent and agno_starter to check for required dependencies and handle errors gracefully. - Updated README files in agno_starter and crewai_starter for better clarity and installation instructions. - Created PHASE3_CODE_QUALITY_REPORT.md to document the implementation results and future recommendations.
…ubleshooting notes
…nd troubleshooting notes for Calendar Scheduling and DSPy Starter agents
…al settings, and troubleshooting notes for the Finance Service Agent
…g notes, and security guidelines for the Pydantic Starter Agent
…instructions, troubleshooting notes, and security guidelines for the OpenAI Agents SDK
…al settings, and troubleshooting notes for the Reasoning Agent
…al settings, and troubleshooting notes for the Nebius AI integration
…nnecessary blank lines
…proved readability and error handling
…dedicated Python scripts for better maintainability and readability
- Added README.md explaining the comprehensive_code_quality_fixer.py tool - Includes usage examples, feature descriptions, and before/after comparisons - Documents integration with CI/CD and quality assurance workflows Related to issue Arindam200#77
WalkthroughRepository-wide improvement initiative adding documentation standards, environment config templates, dependency migration tooling (pip→uv), multiple code-quality tools and scripts, PowerShell orchestration, Python validation utilities, CI workflow for quality checks, and targeted refactors/enhancements in several agent projects (logging, factory patterns, env examples, pyproject manifests). Changes
Sequence Diagram(s)sequenceDiagram
participant Push as Push / PR / Schedule
participant QA as GitHub Actions (quality-assurance)
participant Docs as documentation-quality
participant Deps as dependency-analysis
participant Code as code-quality
participant Struct as project-structure
participant Sum as generate-summary
Push->>QA: trigger workflow
QA->>Docs: run markdownlint\nvalidate .env examples
QA->>Deps: analyze dependencies\nattempt uv/pip sync checks
QA->>Code: run ruff, mypy, bandit\ncheck-hardcoded-secrets
QA->>Struct: validate project structure
par Parallel
Docs->>Sum: send status
Deps->>Sum: send status
Code->>Sum: send status
Struct->>Sum: send status
end
Sum->>Sum: generate quality-report.md\nupload artifact
Sum->>Push: provide summary
Estimated code review effort🎯 4 (Complex) | ⏱️ ~45–75 minutes Areas requiring extra attention:
Possibly related issues
Possibly related PRs
Suggested labels
Suggested reviewers
Poem
Pre-merge checks and finishing touches❌ Failed checks (1 inconclusive)
✅ Passed checks (2 passed)
✨ Finishing touches
🧪 Generate unit tests (beta)
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Actionable comments posted: 32
Caution
Some comments are outside the diff and can’t be posted inline due to platform limitations.
⚠️ Outside diff range comments (6)
advance_ai_agents/finance_service_agent/controllers/ask.py (1)
46-56: Add return type annotation and improve input validation.The function has two issues:
- Missing return type annotation
- Input validation
if not querydoesn't verify the type is a string, which could cause runtime errorsApply this diff:
-def nebius_chat(query: str): +def nebius_chat(query: str) -> Dict[str, Any]: + if not isinstance(query, str): + return {"error": "Query must be a string"} if not query: return {"error": "Query parameter is required"} try: response = chat_agent.run(query) answer = response.content return {"question": query, "answer": answer} except Exception as e: return {"error": str(e)}advance_ai_agents/finance_service_agent/controllers/agents.py (1)
27-31: Remove duplicate import.
Agentis imported twice fromagno.agent(lines 27 and 31).Apply this diff:
# AI assistant imports -from agno.agent import Agent from agno.models.nebius import Nebius from agno.tools.yfinance import YFinanceTools from agno.tools.duckduckgo import DuckDuckGoTools from agno.agent import Agent, RunResponseadvance_ai_agents/finance_service_agent/utils/redisCache.py (1)
39-47: Gracefully handle missing/invalid REDIS_URL and log instead of printingIf REDIS_URL is unset or invalid, routes depending on the cache currently break on None. Short-circuit the lifespan and keep the app running without cache.
async def lifespan(_: FastAPI): redis_client = None try: - redis_client = aioredis.from_url(REDIS_URL, encoding="utf-8", decode_responses=True) + if not REDIS_URL: + logger.warning("REDIS_URL not set; cache disabled.") + yield + return + redis_client = aioredis.from_url(REDIS_URL, encoding="utf-8", decode_responses=True) FastAPICache.init(RedisBackend(redis_client), prefix="fastapi-cache") - logger.info("✅ Redis cache initialized successfully!") + logger.info("✅ Redis cache initialized successfully!") yield except Exception as e: - print(f"❌ Redis Connection Error: {e}") + logger.exception("❌ Redis Connection Error") yieldadvance_ai_agents/finance_service_agent/routes/stockRoutes.py (3)
49-49: Broaden cache type and handle absence gracefullyget_cache may return None or a different backend. Loosen the annotation and guard cache usage to avoid 500s when Redis isn’t configured.
-async def read_top_stocks(request: Request, cache: RedisBackend = Depends(get_cache)): +async def read_top_stocks(request: Request, cache: Any = Depends(get_cache)):-async def stock_news(request: Request, cache: RedisBackend = Depends(get_cache)): +async def stock_news(request: Request, cache: Any = Depends(get_cache)):-async def read_stock(request: Request, symbol: str, cache: RedisBackend = Depends(get_cache)): +async def read_stock(request: Request, symbol: str, cache: Any = Depends(get_cache)):-async def get_stock_analysis(request: Request, symbol: str, cache: RedisBackend = Depends(get_cache)): +async def get_stock_analysis(request: Request, symbol: str, cache: Any = Depends(get_cache)):Also applies to: 76-76, 103-103, 133-133
51-58: Make caching optional when backend is unavailableGuard cache get/set to prevent attribute errors when Redis is not initialized.
- cached_result = await cache.get(cache_key) + cached_result = await cache.get(cache_key) if cache else None @@ - await cache.set(cache_key, json.dumps(result), 10) + if cache: + await cache.set(cache_key, json.dumps(result), 10)- cached_result = await cache.get(cache_key) + cached_result = await cache.get(cache_key) if cache else None @@ - await cache.set(cache_key, json.dumps(result), 300) + if cache: + await cache.set(cache_key, json.dumps(result), 300)- cached_result = await cache.get(cache_key) + cached_result = await cache.get(cache_key) if cache else None @@ - await cache.set(cache_key, json.dumps(result), 10) + if cache: + await cache.set(cache_key, json.dumps(result), 10)- cached_result = await cache.get(cache_key) + cached_result = await cache.get(cache_key) if cache else None- await cache.set(cache_key, json.dumps(result), 300) + if cache: + await cache.set(cache_key, json.dumps(result), 300)Also applies to: 78-85, 106-113, 141-144, 163-164
147-148: Avoid blocking the event loop: offload sync agent.run()Agent.run is synchronous and performs I/O. Run it in a threadpool to keep the async endpoint responsive.
-from controllers.stockAgent import stock_analyzer_agent, extract_json_from_response, create_default_stock_data, merge_stock_data +from controllers.stockAgent import stock_analyzer_agent, extract_json_from_response, create_default_stock_data, merge_stock_data +from starlette.concurrency import run_in_threadpool- response = stock_analyzer_agent.run(prompt) + response = await run_in_threadpool(stock_analyzer_agent.run, prompt)Also applies to: 7-7
🧹 Nitpick comments (57)
starter_ai_agents/pydantic_starter/.env.example (1)
90-90: Add a trailing newline at the end of the file.POSIX compliance and many linters expect a final newline character at the end of text files.
Apply this diff to add a trailing newline:
# Support: # - Pydantic Documentation: https://docs.pydantic.dev/ # - Issues: https://github.com/Arindam200/awesome-ai-apps/issues # - Community: Join discussions in GitHub issues +advance_ai_agents/finance_service_agent/controllers/ask.py (3)
1-5: Update the placeholder module docstring.The docstring contains generic placeholder text. Consider updating it to describe the module's actual purpose.
Apply this diff:
""" -Ask +Finance Service Agent - Ask Controller -Module description goes here. +Provides chat functionality for the finance service agent using Nebius AI. +Handles user queries about investments and financial advice. """
7-7: Remove unused type imports.The imports
List,Optional,Union, andAnyare not used in this module.Apply this diff:
-from typing import List, Dict, Optional, Union, Any +from typing import Dict, Any
13-25: Logger is configured but never used.The logging configuration is set up, but the
loggerinstance is never used in the code. Consider either using it in thenebius_chatfunction to log queries and errors, or removing the unused configuration.If you want to use logging, apply these changes:
def nebius_chat(query: str): + logger.info(f"Received query: {query[:100]}...") # Log first 100 chars if not query: + logger.warning("Empty query received") return {"error": "Query parameter is required"} try: response = chat_agent.run(query) answer = response.content + logger.info("Successfully generated response") return {"question": query, "answer": answer} except Exception as e: + logger.error(f"Error processing query: {str(e)}", exc_info=True) return {"error": str(e)}starter_ai_agents/agno_starter/main.py (4)
13-13: Remove unused import.The
sysmodule is imported but never used in the code. Themain()function usesreturninstead ofsys.exit().Apply this diff:
-import sys
41-41: Consider making the log file path configurable.The log file is hardcoded to
'tech_analyst.log'in the current working directory. For better flexibility, consider:
- Using an environment variable for the log file path
- Creating logs in a dedicated
logs/directory- Using a standard location like
~/.cache/or temp directoryExample:
+import pathlib + +# Create logs directory if it doesn't exist +log_dir = pathlib.Path('logs') +log_dir.mkdir(exist_ok=True) + logging.basicConfig( level=logging.INFO, format='%(asctime)s - %(name)s - %(levelname)s - %(message)s', handlers=[ - logging.FileHandler('tech_analyst.log'), + logging.FileHandler(log_dir / 'tech_analyst.log'), logging.StreamHandler() ] )
112-112: Remove or document the commented-out parameter.The
memory=Trueparameter is commented out without explanation. Either remove it if not needed, or add a TODO comment explaining why it's disabled and when it should be enabled.Options:
- # memory=True, # Enable memory for context retentionOr with explanation:
- # memory=True, # Enable memory for context retention + # TODO: Enable memory=True once persistence backend is configured
191-195: Remove redundant None check.The check
if agent is not None:is unnecessary becausecreate_agent()either returns an agent or raises an exception—it never returnsNone. Once the return type is corrected (as suggested earlier), this defensive check becomes redundant.Apply this diff:
# Get agent response - if agent is not None: - agent.print_response(user_input) - logger.info("Response generated successfully") - else: - print("Agent is not available. Please check agno framework installation.") + agent.print_response(user_input) + logger.info("Response generated successfully")advance_ai_agents/finance_service_agent/controllers/agents.py (2)
1-5: Complete the module docstring.The placeholder text should be replaced with a meaningful description of this module's purpose and functionality.
Apply this diff:
""" -Agents +Finance Service Agent Controllers -Module description goes here. +Defines AI agents for financial analysis and web search capabilities. +Includes web_search_agent, financial_agent, and multi_ai team configuration. """
14-21: Consider moving logging configuration to application entry point.Calling
logging.basicConfig()at the module level can cause issues when multiple modules configure logging or when the application already has a logging setup. The first call tobasicConfig()takes effect, and subsequent calls are ignored.For better control and flexibility, consider:
- Moving this configuration to the main application entry point (e.g.,
main.pyorapp.py)- Or using a dedicated logging configuration file
- Controllers should only create loggers, not configure the entire logging system
If centralized configuration is not feasible, you can make this configuration conditional:
-# Configure logging -logging.basicConfig( - level=logging.INFO, - format='%(asctime)s - %(name)s - %(levelname)s - %(message)s', - handlers=[ - logging.FileHandler('app.log'), - logging.StreamHandler() - ] -) +# Configure logging (only if not already configured) +if not logging.getLogger().handlers: + logging.basicConfig( + level=logging.INFO, + format='%(asctime)s - %(name)s - %(levelname)s - %(message)s', + handlers=[ + logging.FileHandler('app.log'), + logging.StreamHandler() + ] + )simple_ai_agents/cal_scheduling_agent/.env.example (1)
105-105: Add newline at end of file.The file is missing a trailing newline, which is recommended by POSIX standards and expected by many tools.
.github/scripts/parse-bandit-report.py (1)
7-7: Consider adding type hints for consistency.While not critical for this script, adding return type hints would align with the code quality standards documented in PHASE3_CODE_QUALITY_REPORT.md.
Apply this diff:
-def main(): +def main() -> None: """Parse bandit JSON report and display security issues."""advance_ai_agents/finance_service_agent/.env.example (1)
118-118: Add newline at end of file.The file is missing a trailing newline, which is recommended by POSIX standards.
starter_ai_agents/dspy_starter/.env.example (1)
1-95: Add final newline for POSIX compliance.The file is missing a blank line at the end, which is a POSIX text file standard and helps with consistent file handling across tools.
Apply this fix by adding a single blank line after line 95.
starter_ai_agents/openai_agents_sdk/.env.example (1)
1-112: Add final newline for POSIX compliance.The file is missing a blank line at the end. Adding it ensures compliance with POSIX text file standards and consistent tool handling.
Add a single blank line after line 112.
.github/scripts/analyze-dependencies.py (2)
28-29: Add exception handling for file operations.Reading the
pyproject.tomlfile without exception handling could cause the script to crash if the file is corrupted, has encoding issues, or is locked by another process.Apply this diff to add error handling:
if os.path.exists(pyproject_path): - with open(pyproject_path, 'r') as f: - content = f.read() + try: + with open(pyproject_path, 'r', encoding='utf-8') as f: + content = f.read() + except Exception as e: + print(f'⚠ {project} - Error reading pyproject.toml: {e}') + continue + if 'requires-python' in content and 'hatchling' in content:
30-30: Broaden the modernization criteria to include other valid build backends.The current check only recognizes
hatchlingas a modern build backend, but other modern systems likesetuptools>=61(with declarative metadata),poetry-core,flit-core, andpdm-backendare equally valid for modern Python projects.Consider updating the criteria:
- if 'requires-python' in content and 'hatchling' in content: + # Check for modern build backend + modern_backends = ['hatchling', 'poetry-core', 'flit-core', 'pdm-backend', + 'setuptools>=61', 'setuptools >='] + has_modern_backend = any(backend in content for backend in modern_backends) + + if 'requires-python' in content and has_modern_backend: print(f' {project} - Modern pyproject.toml')This provides a more accurate assessment of modernization across different tooling choices.
.github/scripts/check-hardcoded-secrets.py (2)
13-18: Consider expanding secret detection patterns.The current patterns cover basic cases (api_key, password, secret, token) but miss common secret types like AWS keys, private keys, database URLs, and bearer tokens. Additionally, the patterns might generate false positives for legitimate code comments or documentation.
Consider these enhancements:
secret_patterns = [ r'api[_-]?key\s*=\s*["\'][^"\']+["\']', r'password\s*=\s*["\'][^"\']+["\']', r'secret\s*=\s*["\'][^"\']+["\']', r'token\s*=\s*["\'][^"\']+["\']', + r'bearer\s+[A-Za-z0-9\-._~+/]+=*', + r'AKIA[0-9A-Z]{16}', # AWS Access Key + r'-----BEGIN\s+(?:RSA\s+)?PRIVATE\s+KEY-----', # Private keys + r'mongodb(\+srv)?://[^\s]+', # MongoDB connection strings ]
40-46: Add exit code to indicate secret detection for CI/CD integration.The script currently exits with code 0 even when secrets are detected. For CI/CD integration (as mentioned in the related quality-assurance workflow), the script should exit with a non-zero code when potential secrets are found.
if issues_found == 0: print('✓ No hardcoded secrets detected') else: print(f'Found {issues_found} potential hardcoded secrets') + exit(1) # Fail CI/CD pipeline if secrets found if __name__ == '__main__': main()simple_ai_agents/newsletter_agent/pyproject.toml (1)
12-17: Align dependency version constraints with repository standards.The current dependency declarations use unbounded
>=constraints, which allows breaking changes in future major versions. This contradicts the UV Migration Guide standards that recommend constraining major versions for reproducibility.Based on the UV_MIGRATION_GUIDE.md standards, apply these constraints:
dependencies = [ - "agno>=1.5.1", - "openai>=1.78.1", - "python-dotenv>=1.1.0", - "requests>=2.31.0", + "agno>=1.5.1,<2.0.0", + "openai>=1.78.1,<2.0.0", + "python-dotenv>=1.1.0,<2.0.0", + "requests>=2.31.0,<3.0.0", ]Based on learnings from .github/standards/UV_MIGRATION_GUIDE.md lines 179-202.
.github/standards/ENVIRONMENT_CONFIG_STANDARDS.md (2)
482-528: Environment validation script looks good.The validation script provides a solid foundation for checking required environment variables. The logic correctly handles missing variables and provides clear user feedback.
Consider adding an optional enhancement to show how to integrate this with application startup:
# In your main application file (e.g., app.py or main.py) if __name__ == "__main__": # Validate environment before starting if not validate_environment(): sys.exit(1) # Continue with application startup app.run()
16-199: Reconsider quote usage in .env.example templates.The templates consistently show environment variable values wrapped in quotes (e.g.,
NEBIUS_API_KEY="your_nebius_api_key_here"). While this works, it's inconsistent with common.envfile practices where quotes are typically only used when values contain spaces or special characters. The static analysis tool (dotenv-linter) has flagged this pattern in the actual.env.examplefiles.Consider using unquoted placeholders for simple values:
-NEBIUS_API_KEY="your_nebius_api_key_here" +NEBIUS_API_KEY=your_nebius_api_key_here -APP_ENV="development" +APP_ENV=developmentKeep quotes only when necessary:
APP_TITLE="My App Name" # Contains spaces, quotes needed SECRET_KEY=your_generated_secret_key_here # No spaces, quotes optionalThis aligns with standard
.envfile conventions and eliminates static analysis warnings.starter_ai_agents/agno_starter/.env.example (1)
18-18: Consider removing unnecessary quotes from placeholder values.The dotenv-linter tool flags the use of quotes around the placeholder value. While functional, quotes are typically unnecessary for simple alphanumeric placeholder values in
.envfiles and can be confusing for users.This aligns with the recommendation made for ENVIRONMENT_CONFIG_STANDARDS.md. Consider:
-NEBIUS_API_KEY="your_nebius_api_key_here" +NEBIUS_API_KEY=your_nebius_api_key_here.github/standards/UV_MIGRATION_GUIDE.md (1)
152-162: Consider providing tiered mypy configuration options.The template includes a very strict mypy configuration with
disallow_untyped_defs,disallow_any_generics, anddisallow_incomplete_defsall set to true. While excellent for production code, this may be challenging for starter/learning projects and could discourage newcomers.Consider adding a comment about adjusting strictness for different project types:
[tool.mypy] python_version = "3.10" +# For starter/learning projects, consider setting these to false initially: +# - disallow_untyped_defs +# - disallow_incomplete_defs +# - disallow_any_generics check_untyped_defs = true disallow_any_generics = trueOr provide separate templates for "Starter" vs "Production" configurations.
.github/scripts/improve-docs.ps1 (2)
104-139: Add warning about generated pyproject.toml requiring manual review.The script generates a pyproject.toml with hardcoded dependencies (lines 122-125) that may not match the actual project requirements. While this may be suitable for the specific "key projects" listed in the script, it could lead to issues if used on other projects.
Add a warning message and comment in the generated file:
$PyProject = @" [project] name = "$SafeName" version = "0.1.0" description = "AI agent application built with modern Python tools" +# NOTE: This file was auto-generated. Please review and update dependencies. authors = [ {name = "Arindam Majumder", email = "[email protected]"} ]And in the script output:
Set-Content -Path $PyProjectPath -Value $PyProject -Encoding UTF8 - Write-Log " pyproject.toml created" + Write-Log " pyproject.toml created - MANUAL REVIEW REQUIRED" + Write-Log " Please verify dependencies match requirements.txt"
144-171: Consider adding path validation and error handling.The script assumes it's run from the repository root but doesn't validate this. Adding a check would prevent unexpected behavior.
+# Validate we're in the repository root +if (-not (Test-Path ".git")) { + Write-Log "ERROR: This script must be run from the repository root" + exit 1 +} + # Main execution if ($ProjectPath -ne "") { Update-SingleProject -Path $ProjectPathAdditionally, consider wrapping the Update-SingleProject function content in try-catch to handle file I/O errors gracefully.
simple_ai_agents/finance_agent/main.py (2)
34-41: Consider making the log file path configurable.The hardcoded log file path
'finance_agent.log'could benefit from environment-based configuration for deployment flexibility.Optional enhancement:
+LOG_FILE = os.getenv("LOG_FILE", "finance_agent.log") + logging.basicConfig( level=logging.INFO, format='%(asctime)s - %(name)s - %(levelname)s - %(message)s', handlers=[ - logging.FileHandler('finance_agent.log'), + logging.FileHandler(LOG_FILE), logging.StreamHandler() ] )
50-102: Type hint could be more precise.The return type
Optional[Any]is overly broad. Consider usingOptional[Agent]for better type safety and IDE support.Apply this diff:
-def create_finance_agent() -> Optional[Any]: +def create_finance_agent() -> Optional["Agent"]: """Create and configure the AI finance agent. Returns: - Agent: Configured finance agent with tools and model, or None if dependencies unavailable + Optional[Agent]: Configured finance agent with tools and model, or None if dependencies unavailableNote: Using string quotes for forward reference if Agent is conditionally imported.
.github/tools/code_quality_enhancer.py (1)
29-39: Consider parameterizing the log file name.Similar to other files in this PR, the hardcoded log file path could benefit from configurability for different environments.
Optional enhancement:
- def _setup_logging(self) -> logging.Logger: + def _setup_logging(self, log_file: str = 'code_quality_enhancement.log') -> logging.Logger: """Setup logging configuration.""" logging.basicConfig( level=logging.INFO, format='%(asctime)s - %(name)s - %(levelname)s - %(message)s', handlers=[ - logging.FileHandler('code_quality_enhancement.log'), + logging.FileHandler(log_file), logging.StreamHandler() ] )advance_ai_agents/finance_service_agent/controllers/stockAgent.py (4)
39-43: Avoid creating a FastAPI app inside a controller moduleThis object isn’t used here and can confuse app assembly or tests. Define the app in a single composition module and include routers/controllers there.
-app = FastAPI( - title="Stock Analysis API", - description="API for fetching detailed stock analysis information", - version="1.0.0" -)
116-116: Replace print with logger to keep observability consistentUse the module logger instead of prints.
- print(f"Failed to parse JSON from markdown code block") + logger.warning("Failed to parse JSON from markdown code block")- print(f"Failed to parse JSON from pattern match") + logger.warning("Failed to parse JSON from pattern match")Also applies to: 130-130
170-171: Use deep copy to avoid mutating caller’s nested structuresdefault_data.copy() is shallow; nested dicts remain shared.
- result = default_data.copy() + result = copy.deepcopy(default_data)Add once near imports:
+import copy
36-37: Avoid import-time crashes on missing NEBIUS_API_KEY; lazily init the agentRaising ValueError at import and constructing the Agent at import make test and tooling imports brittle. Prefer lazy/guarded init (at startup or first use) and return a 503 if unavailable.
Would you like a small patch that introduces get_stock_analyzer_agent() with cached lazy init and updates routes to call it?
Also applies to: 82-96
advance_ai_agents/finance_service_agent/utils/redisCache.py (1)
53-55: Use logger for teardown errorsReplace prints with logger for consistency and stack traces.
- logger.info("🔴 Redis connection closed!") + logger.info("🔴 Redis connection closed!") except Exception as e: - print(f"❌ Error while closing Redis: {e}") + logger.exception("❌ Error while closing Redis")simple_ai_agents/finance_agent/.env.example (1)
18-18: Satisfy dotenv-linter: unquote value and add trailing newlineAlign with the linter output to keep CI green. Quotes can be omitted for placeholders.
Based on static analysis hints
-NEBIUS_API_KEY="your_nebius_api_key_here" +NEBIUS_API_KEY=your_nebius_api_key_here +Also applies to: 84-84
.github/scripts/validate-project-structure.py (2)
31-33: Ignore hidden/system directories to reduce false positivesLimit projects to visible directories and skip common non-project folders.
- projects = [d for d in os.listdir(category) if os.path.isdir(os.path.join(category, d))] + projects = [ + d for d in os.listdir(category) + if os.path.isdir(os.path.join(category, d)) + and not d.startswith('.') + and d not in {'__pycache__', 'node_modules', '.venv', 'templates'} + ]
58-66: Handle empty repository gracefully and make threshold configurableAvoid failing CI when no projects are found and allow tuning compliance threshold.
- compliance_rate = (compliant_projects / total_projects) * 100 if total_projects else 0 + compliance_rate = (compliant_projects / total_projects) * 100 if total_projects else 100 print(f'Overall compliance: {compliance_rate:.1f}% ({compliant_projects}/{total_projects})') - if compliance_rate < 90: + threshold = int(os.getenv('PROJECT_STRUCTURE_THRESHOLD', '90')) + if total_projects == 0: + print('No projects found in defined categories; skipping enforcement') + sys.exit(0) + if compliance_rate < threshold: print(' Project structure compliance below 90%') sys.exit(1) else: print(' Good project structure compliance')advance_ai_agents/finance_service_agent/app.py (2)
17-25: Centralize logging; avoid per-module basicConfig and file handlers.basicConfig at import-time with a FileHandler can duplicate handlers under Uvicorn/Gunicorn and write to non-writable FS. Prefer a single setup (stdout) in the entrypoint or rely on Uvicorn logging.
Apply:
-logging.basicConfig( - level=logging.INFO, - format='%(asctime)s - %(name)s - %(levelname)s - %(message)s', - handlers=[ - logging.FileHandler('finance_service.log'), - logging.StreamHandler() - ] -) +if not logging.getLogger().handlers: + logging.basicConfig( + level=logging.INFO, + format='%(asctime)s - %(name)s - %(levelname)s - %(message)s', + handlers=[logging.StreamHandler()] + )
70-81: Avoid hardcoding version; surface app.version.Keeps /health consistent with app metadata.
Apply:
-@app.get("/health") -async def health_check() -> dict: +@app.get("/health") +async def health_check() -> dict: @@ - "version": "1.0.0" + "version": app.version }.github/scripts/validate-env-examples.py (1)
9-10: Harden script I/O and exit handling.Use explicit UTF‑8 and sys.exit for CI friendliness.
Apply:
@@ - with open(file_path, 'r') as f: + with open(file_path, 'r', encoding='utf-8', errors='replace') as f: @@ - print(f'Too many documentation issues ({total_issues})') - exit(1) + print(f'Too many documentation issues ({total_issues})') + import sys + sys.exit(1)Also applies to: 39-41
advance_ai_agents/finance_service_agent/controllers/stockNews.py (2)
17-25: Avoid per-module basicConfig and file writes.Same logging concern as app.py; centralize logging and prefer stdout only.
Apply:
-logging.basicConfig( - level=logging.INFO, - format='%(asctime)s - %(name)s - %(levelname)s - %(message)s', - handlers=[ - logging.FileHandler('app.log'), - logging.StreamHandler() - ] -) +if not logging.getLogger().handlers: + logging.basicConfig( + level=logging.INFO, + format='%(asctime)s - %(name)s - %(levelname)s - %(message)s', + handlers=[logging.StreamHandler()] + )
37-41: Remove unused requests Session (or use it).Session is configured but never used in this module.
Apply:
-session = requests.Session() -session.headers.update({ - "User-Agent": "Chrome/122.0.0.0" -}) +# HTTP session not required here; using finnhub SDK client instead.advance_ai_agents/finance_service_agent/controllers/topStocks.py (3)
15-23: Centralize logging; avoid file handlers here too.Keep logging setup in one place; modules should just
getLogger(__name__).Apply:
-logging.basicConfig( - level=logging.INFO, - format='%(asctime)s - %(name)s - %(levelname)s - %(message)s', - handlers=[ - logging.FileHandler('app.log'), - logging.StreamHandler() - ] -) +if not logging.getLogger().handlers: + logging.basicConfig( + level=logging.INFO, + format='%(asctime)s - %(name)s - %(levelname)s - %(message)s', + handlers=[logging.StreamHandler()] + )
70-83: Speed up per‑ticker info retrieval.
Ticker.infois slow and fragile. Preferfast_infowith fallbacks.Apply:
- info = tickers.tickers[stock_symbol].info - stock_info = { - 'symbol': stock_symbol, - 'name': info.get('shortName', 'N/A'), - 'currentPrice': info.get('currentPrice', 'N/A'), - 'previousClose': info.get('previousClose', 'N/A'), - 'sector': info.get('sector', 'N/A') - } + tkr = tickers.tickers[stock_symbol] + fi = getattr(tkr, "fast_info", None) + info = {} + try: + info = tkr.get_info() # safer wrapper; still may be slow + except Exception: + pass + stock_info = { + 'symbol': stock_symbol, + 'name': info.get('shortName', 'N/A'), + 'currentPrice': (getattr(fi, "last_price", None) if fi else None) or info.get('currentPrice', 'N/A'), + 'previousClose': (getattr(fi, "previous_close", None) if fi else None) or info.get('previousClose', 'N/A'), + 'sector': info.get('sector', 'N/A') + }
118-120: Avoid sleeping on the error path.Sleeping in request handling increases latency and ties up workers. Prefer returning promptly and letting callers retry with backoff.
Apply:
- logger.error(f"❌ Error fetching {symbol}: {e}") - time.sleep(5) - return {} + logger.error(f"❌ Error fetching {symbol}: {e}") + return {}.github/workflows/quality-assurance.yml (1)
99-102: Run Safety since it’s installed.Add a step to actually scan dependencies.
Apply:
- name: Install analysis tools run: | pip install ruff mypy bandit safety + + - name: Vulnerability scan with Safety + run: | + echo "Running Safety vulnerability scan..." + safety check --full-report || echo "Vulnerabilities found".github/scripts/standardize-documentation.ps1 (11)
7-11: Promote to an advanced script; add -WhatIf/-Confirm and validate Category.Adopt CmdletBinding, keep -DryRun for now but prefer -WhatIf long-term; validate Category to avoid typos.
+[CmdletBinding(SupportsShouldProcess=$true, ConfirmImpact='Low')] param( - [string]$Category = "all", # Which category to process: starter, simple, rag, advance, mcp, memory, all - [switch]$DryRun = $false, # Preview changes without applying them - [switch]$Verbose = $false # Show detailed output + [ValidateSet('starter','simple','rag','advance','mcp','memory','all')] + [string]$Category = 'all', # Which category to process + [switch]$DryRun, # Preview without applying (consider replacing with -WhatIf) + [switch]$Verbose # Use Write-Verbose for details )
13-17: Enable strict mode/stop-on-error and drop unused vars.Harden script and remove dead config entries.
-# Configuration -$RepoRoot = Get-Location -$StandardsDir = ".github\standards" -$LogFile = "documentation_upgrade.log" +$ErrorActionPreference = 'Stop' +Set-StrictMode -Version Latest + +# Configuration +$LogFile = "documentation_upgrade.log"
29-35: Harden logging; avoid Write-Host and ensure file exists.Use Write-Information, validate Level, and create the log file if missing.
-function Write-Log { - param([string]$Message, [string]$Level = "INFO") +function Write-Log { + [CmdletBinding()] + param( + [Parameter(Mandatory)] + [string]$Message, + [ValidateSet('INFO','WARNING','ERROR','DEBUG')] + [string]$Level = 'INFO' + ) $Timestamp = Get-Date -Format "yyyy-MM-dd HH:mm:ss" $LogEntry = "[$Timestamp] [$Level] $Message" - Write-Host $LogEntry - Add-Content -Path $LogFile -Value $LogEntry + Write-Information $LogEntry + if (-not (Test-Path -LiteralPath $LogFile)) { New-Item -ItemType File -Path $LogFile -Force | Out-Null } + Add-Content -Path $LogFile -Value $LogEntry }
38-46: Don’t call exit inside a function; throw instead.Exit terminates the host/runner; throwing is safer and catchable.
- Write-Error "Required file $file not found. Please run this script from the repository root." - exit 1 + throw "Required file '$file' not found. Please run this script from the repository root."
179-186: Avoid quota claims that will stale.Replace hard-coded “Free tier” text with a durable note.
-# Free tier: 100 requests/minute +# Note: Free tiers/quotas change frequently—check provider docs for current limits
315-318: Prefer Write-Verbose over custom $Verbose gates.Leverage common -Verbose for consistency.
- if ($Verbose) { - Write-Log " README issues: $($ReadmeQuality.Issues -join ', ')" - Write-Log " .env.example issues: $($EnvQuality.Issues -join ', ')" - } + Write-Verbose (" README issues: {0}" -f ($ReadmeQuality.Issues -join ', ')) + Write-Verbose (" .env.example issues: {0}" -f ($EnvQuality.Issues -join ', '))Also add
[CmdletBinding()]inside Update-Project to enable Write-Verbose:-function Update-Project { +function Update-Project { + [CmdletBinding()]
362-365: Replace exit with throw for invalid category.Terminate with an exception so callers/CI can catch.
- Write-Error "Invalid category: $Category. Valid options: $($Categories.Keys -join ', '), all" - exit 1 + throw "Invalid category: $Category. Valid options: $($Categories.Keys -join ', '), all"
387-390: Add GitHub job summary for CI visibility.Surface results to Actions UI.
Write-Log "Documentation standardization completed" Write-Log "Processed $ProcessedProjects out of $TotalProjects projects" Write-Log "Log file: $LogFile" + + if ($env:GITHUB_STEP_SUMMARY) { +@" +### Documentation standardization +- Category: $Category +- Projects processed: $ProcessedProjects / $TotalProjects +- Log: $LogFile +"@ | Out-File -FilePath $env:GITHUB_STEP_SUMMARY -Append -Encoding utf8 + }
120-148: Tighten regex heuristics to reduce false positives.Patterns like
https?://.*apiare broad. Narrow them to known providers or required domains.- $HasApiKeyLinks = $Content -match "https?://.*api" -or $Content -match "studio\.nebius\.ai" + $HasApiKeyLinks = $Content -match "https?://(studio\.nebius\.ai|platform\.openai\.com|pinecone\.io|qdrant\.tech)\b"
371-385: Deriving CategoryType via -replace is brittle.Map category path → type explicitly to avoid surprises if directory names change.
# Example $typeMap = @{ 'starter_ai_agents'='starter'; 'simple_ai_agents'='simple'; 'rag_apps'='rag' 'advance_ai_agents'='advance'; 'mcp_ai_agents'='mcp'; 'memory_agents'='memory' } Update-Project -ProjectPath $ProjectPath -CategoryType $typeMap[$CategoryPath]
60-100: Header detection: anchor to headings to avoid accidental matches.Avoid matching emoji/body text; anchor to start-of-line markdown headers.
- $HasFeatures = $Content -match "## .*Features" -or $Content -match "🚀.*Features" + $HasFeatures = $Content -match "(?m)^\s*##\s+Features\b" - $HasTechStack = $Content -match "## .*Tech Stack" -or $Content -match "🛠️.*Tech Stack" + $HasTechStack = $Content -match "(?m)^\s*##\s+Tech Stack\b" - $HasInstallation = $Content -match "## .*Installation" -or $Content -match "⚙️.*Installation" + $HasInstallation = $Content -match "(?m)^\s*##\s+Installation\b" - $HasUsage = $Content -match "## .*Usage" -or $Content -match "🚀.*Usage" + $HasUsage = $Content -match "(?m)^\s*##\s+Usage\b" - $HasContributing = $Content -match "## .*Contributing" -or $Content -match "🤝.*Contributing" + $HasContributing = $Content -match "(?m)^\s*##\s+Contributing\b" - $HasTroubleshooting = $Content -match "## .*Troubleshooting" -or $Content -match "🐛.*Troubleshooting" + $HasTroubleshooting = $Content -match "(?m)^\s*##\s+Troubleshooting\b" - $HasProjectStructure = $Content -match "## .*Project Structure" -or $Content -match "📂.*Project Structure" + $HasProjectStructure = $Content -match "(?m)^\s*##\s+Project Structure\b"
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Review profile: CHILL
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📒 Files selected for processing (47)
.github/implementation/IMPROVEMENT_SUMMARY.md(1 hunks).github/implementation/PHASE3_CODE_QUALITY_REPORT.md(1 hunks).github/scripts/analyze-dependencies.py(1 hunks).github/scripts/apply-code-quality.ps1(1 hunks).github/scripts/check-hardcoded-secrets.py(1 hunks).github/scripts/improve-docs.ps1(1 hunks).github/scripts/migrate-to-uv.ps1(1 hunks).github/scripts/parse-bandit-report.py(1 hunks).github/scripts/standardize-documentation.ps1(1 hunks).github/scripts/validate-env-examples.py(1 hunks).github/scripts/validate-project-structure.py(1 hunks).github/standards/ENVIRONMENT_CONFIG_STANDARDS.md(1 hunks).github/standards/README_STANDARDIZATION_GUIDE.md(1 hunks).github/standards/UV_MIGRATION_GUIDE.md(1 hunks).github/tools/README.md(1 hunks).github/tools/code_quality_enhancer.py(1 hunks).github/workflows/quality-assurance.yml(1 hunks)advance_ai_agents/deep_researcher_agent/.env.example(1 hunks)advance_ai_agents/finance_service_agent/.env.example(1 hunks)advance_ai_agents/finance_service_agent/app.py(1 hunks)advance_ai_agents/finance_service_agent/controllers/agents.py(1 hunks)advance_ai_agents/finance_service_agent/controllers/ask.py(1 hunks)advance_ai_agents/finance_service_agent/controllers/stockAgent.py(2 hunks)advance_ai_agents/finance_service_agent/controllers/stockNews.py(1 hunks)advance_ai_agents/finance_service_agent/controllers/topStocks.py(2 hunks)advance_ai_agents/finance_service_agent/routes/agentRoutes.py(2 hunks)advance_ai_agents/finance_service_agent/routes/stockRoutes.py(2 hunks)advance_ai_agents/finance_service_agent/utils/redisCache.py(4 hunks)rag_apps/simple_rag/.env.example(1 hunks)simple_ai_agents/cal_scheduling_agent/.env.example(1 hunks)simple_ai_agents/finance_agent/.env.example(1 hunks)simple_ai_agents/finance_agent/main.py(1 hunks)simple_ai_agents/newsletter_agent/.env.example(1 hunks)simple_ai_agents/newsletter_agent/pyproject.toml(1 hunks)simple_ai_agents/reasoning_agent/.env.example(1 hunks)starter_ai_agents/QUICKSTART.md(1 hunks)starter_ai_agents/agno_starter/.env.example(1 hunks)starter_ai_agents/agno_starter/README.md(1 hunks)starter_ai_agents/agno_starter/main.py(2 hunks)starter_ai_agents/agno_starter/pyproject.toml(1 hunks)starter_ai_agents/crewai_starter/.env.example(1 hunks)starter_ai_agents/crewai_starter/README.md(1 hunks)starter_ai_agents/crewai_starter/pyproject.toml(1 hunks)starter_ai_agents/dspy_starter/.env.example(1 hunks)starter_ai_agents/langchain_langgraph_starter/.env.example(1 hunks)starter_ai_agents/openai_agents_sdk/.env.example(1 hunks)starter_ai_agents/pydantic_starter/.env.example(1 hunks)
🧰 Additional context used
🧬 Code graph analysis (8)
starter_ai_agents/crewai_starter/.env.example (1)
advance_ai_agents/ai-hedgefund/services/nebius-ai/NebiusAIService.ts (1)
constructor(14-24)
.github/scripts/validate-env-examples.py (1)
.github/scripts/validate-project-structure.py (1)
main(7-65)
advance_ai_agents/finance_service_agent/app.py (2)
advance_ai_agents/finance_service_agent/utils/redisCache.py (2)
lifespan(36-55)get_cache(57-58)advance_ai_agents/finance_service_agent/routes/agentRoutes.py (1)
health_check(43-111)
.github/scripts/analyze-dependencies.py (2)
.github/scripts/check-hardcoded-secrets.py (1)
main(8-43).github/scripts/validate-project-structure.py (1)
main(7-65)
.github/scripts/validate-project-structure.py (2)
.github/scripts/analyze-dependencies.py (1)
main(7-45).github/scripts/validate-env-examples.py (1)
main(22-43)
starter_ai_agents/agno_starter/main.py (1)
simple_ai_agents/finance_agent/main.py (1)
main(145-161)
simple_ai_agents/finance_agent/main.py (1)
starter_ai_agents/agno_starter/main.py (1)
main(154-205)
.github/scripts/check-hardcoded-secrets.py (2)
.github/scripts/analyze-dependencies.py (1)
main(7-45).github/scripts/validate-env-examples.py (1)
main(22-43)
🪛 actionlint (1.7.8)
.github/workflows/quality-assurance.yml
48-48: the runner of "actions/setup-python@v4" action is too old to run on GitHub Actions. update the action's version to fix this issue
(action)
95-95: the runner of "actions/setup-python@v4" action is too old to run on GitHub Actions. update the action's version to fix this issue
(action)
🪛 dotenv-linter (4.0.0)
starter_ai_agents/crewai_starter/.env.example
[warning] 1-1: [LeadingCharacter] Invalid leading character detected
(LeadingCharacter)
[warning] 15-15: [QuoteCharacter] The value has quote characters (', ")
(QuoteCharacter)
starter_ai_agents/langchain_langgraph_starter/.env.example
[warning] 1-1: [IncorrectDelimiter] The # langchain_langgraph_starter Environment Configuration key has incorrect delimiter
(IncorrectDelimiter)
[warning] 1-1: [KeyWithoutValue] The # langchain_langgraph_starter Environment Configuration key should be with a value or have an equal sign
(KeyWithoutValue)
[warning] 1-1: [LeadingCharacter] Invalid leading character detected
(LeadingCharacter)
[warning] 1-1: [LowercaseKey] The # langchain_langgraph_starter Environment Configuration key should be in uppercase
(LowercaseKey)
[warning] 6-6: [QuoteCharacter] The value has quote characters (', ")
(QuoteCharacter)
starter_ai_agents/openai_agents_sdk/.env.example
[warning] 18-18: [QuoteCharacter] The value has quote characters (', ")
(QuoteCharacter)
[warning] 25-25: [QuoteCharacter] The value has quote characters (', ")
(QuoteCharacter)
[warning] 112-112: [EndingBlankLine] No blank line at the end of the file
(EndingBlankLine)
rag_apps/simple_rag/.env.example
[warning] 1-1: [IncorrectDelimiter] The # simple_rag Environment Configuration key has incorrect delimiter
(IncorrectDelimiter)
[warning] 1-1: [KeyWithoutValue] The # simple_rag Environment Configuration key should be with a value or have an equal sign
(KeyWithoutValue)
[warning] 1-1: [LeadingCharacter] Invalid leading character detected
(LeadingCharacter)
[warning] 1-1: [LowercaseKey] The # simple_rag Environment Configuration key should be in uppercase
(LowercaseKey)
[warning] 9-9: [QuoteCharacter] The value has quote characters (', ")
(QuoteCharacter)
simple_ai_agents/reasoning_agent/.env.example
[warning] 1-1: [IncorrectDelimiter] The # reasoning_agent Environment Configuration key has incorrect delimiter
(IncorrectDelimiter)
[warning] 1-1: [KeyWithoutValue] The # reasoning_agent Environment Configuration key should be with a value or have an equal sign
(KeyWithoutValue)
[warning] 1-1: [LeadingCharacter] Invalid leading character detected
(LeadingCharacter)
[warning] 1-1: [LowercaseKey] The # reasoning_agent Environment Configuration key should be in uppercase
(LowercaseKey)
[warning] 9-9: [QuoteCharacter] The value has quote characters (', ")
(QuoteCharacter)
simple_ai_agents/newsletter_agent/.env.example
[warning] 1-1: [LeadingCharacter] Invalid leading character detected
(LeadingCharacter)
[warning] 15-15: [QuoteCharacter] The value has quote characters (', ")
(QuoteCharacter)
starter_ai_agents/dspy_starter/.env.example
[warning] 18-18: [QuoteCharacter] The value has quote characters (', ")
(QuoteCharacter)
[warning] 95-95: [EndingBlankLine] No blank line at the end of the file
(EndingBlankLine)
starter_ai_agents/pydantic_starter/.env.example
[warning] 18-18: [QuoteCharacter] The value has quote characters (', ")
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[warning] 90-90: [EndingBlankLine] No blank line at the end of the file
(EndingBlankLine)
advance_ai_agents/deep_researcher_agent/.env.example
[warning] 1-1: [IncorrectDelimiter] The # deep_researcher_agent Environment Configuration key has incorrect delimiter
(IncorrectDelimiter)
[warning] 1-1: [KeyWithoutValue] The # deep_researcher_agent Environment Configuration key should be with a value or have an equal sign
(KeyWithoutValue)
[warning] 1-1: [LeadingCharacter] Invalid leading character detected
(LeadingCharacter)
[warning] 1-1: [LowercaseKey] The # deep_researcher_agent Environment Configuration key should be in uppercase
(LowercaseKey)
[warning] 6-6: [QuoteCharacter] The value has quote characters (', ")
(QuoteCharacter)
simple_ai_agents/cal_scheduling_agent/.env.example
[warning] 17-17: [QuoteCharacter] The value has quote characters (', ")
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[warning] 23-23: [QuoteCharacter] The value has quote characters (', ")
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[warning] 30-30: [QuoteCharacter] The value has quote characters (', ")
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[warning] 105-105: [EndingBlankLine] No blank line at the end of the file
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simple_ai_agents/finance_agent/.env.example
[warning] 18-18: [QuoteCharacter] The value has quote characters (', ")
(QuoteCharacter)
[warning] 84-84: [EndingBlankLine] No blank line at the end of the file
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advance_ai_agents/finance_service_agent/.env.example
[warning] 18-18: [QuoteCharacter] The value has quote characters (', ")
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[warning] 118-118: [EndingBlankLine] No blank line at the end of the file
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starter_ai_agents/agno_starter/.env.example
[warning] 18-18: [QuoteCharacter] The value has quote characters (', ")
(QuoteCharacter)
[warning] 99-99: [EndingBlankLine] No blank line at the end of the file
(EndingBlankLine)
🪛 LanguageTool
starter_ai_agents/agno_starter/README.md
[style] ~11-~11: Consider a different adjective to strengthen your wording.
Context: ...eatures - 🔍 Intelligent Analysis: Deep analysis of HackerNews content, includi...
(DEEP_PROFOUND)
.github/implementation/IMPROVEMENT_SUMMARY.md
[grammar] ~227-~227: Use a hyphen to join words.
Context: ...nd community-focused development in open source projects.*
(QB_NEW_EN_HYPHEN)
starter_ai_agents/crewai_starter/README.md
[style] ~13-~13: Consider a different adjective to strengthen your wording.
Context: ...y Meta-Llama-3.1-70B-Instruct model for deep insights - 📊 Structured Output: We...
(DEEP_PROFOUND)
.github/standards/README_STANDARDIZATION_GUIDE.md
[style] ~23-~23: The words ‘explaining’ and ‘explanations’ are quite similar. Consider replacing ‘explaining’ with a different word.
Context: ...recommended) - [ ] Workflow diagram explaining the process - [ ] **Environment Variabl...
(VERB_NOUN_SENT_LEVEL_REP)
| for project in projects: | ||
| pyproject_path = os.path.join(project, 'pyproject.toml') | ||
| requirements_path = os.path.join(project, 'requirements.txt') | ||
|
|
||
| if os.path.exists(pyproject_path): | ||
| with open(pyproject_path, 'r') as f: | ||
| content = f.read() | ||
| if 'requires-python' in content and 'hatchling' in content: | ||
| print(f' {project} - Modern pyproject.toml') | ||
| modern_projects += 1 | ||
| else: | ||
| print(f' {project} - Basic pyproject.toml (needs enhancement)') | ||
| elif os.path.exists(requirements_path): | ||
| print(f' {project} - Legacy requirements.txt only') | ||
| legacy_projects += 1 |
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Fix the project counting logic.
Projects with "basic pyproject.toml" (line 34) are printed but never counted in either modern_projects or legacy_projects. This causes the modernization rate calculation to be inaccurate, as these projects are excluded from the total count used in line 39.
Apply this diff to fix the counting:
if 'requires-python' in content and 'hatchling' in content:
print(f' {project} - Modern pyproject.toml')
modern_projects += 1
else:
print(f' {project} - Basic pyproject.toml (needs enhancement)')
+ modern_projects += 1 # Still counts as modern, just needs enhancement
elif os.path.exists(requirements_path):
print(f' {project} - Legacy requirements.txt only')
legacy_projects += 1Alternatively, introduce a basic_projects counter and adjust the modernization calculation accordingly.
📝 Committable suggestion
‼️ IMPORTANT
Carefully review the code before committing. Ensure that it accurately replaces the highlighted code, contains no missing lines, and has no issues with indentation. Thoroughly test & benchmark the code to ensure it meets the requirements.
| for project in projects: | |
| pyproject_path = os.path.join(project, 'pyproject.toml') | |
| requirements_path = os.path.join(project, 'requirements.txt') | |
| if os.path.exists(pyproject_path): | |
| with open(pyproject_path, 'r') as f: | |
| content = f.read() | |
| if 'requires-python' in content and 'hatchling' in content: | |
| print(f' {project} - Modern pyproject.toml') | |
| modern_projects += 1 | |
| else: | |
| print(f' {project} - Basic pyproject.toml (needs enhancement)') | |
| elif os.path.exists(requirements_path): | |
| print(f' {project} - Legacy requirements.txt only') | |
| legacy_projects += 1 | |
| for project in projects: | |
| pyproject_path = os.path.join(project, 'pyproject.toml') | |
| requirements_path = os.path.join(project, 'requirements.txt') | |
| if os.path.exists(pyproject_path): | |
| with open(pyproject_path, 'r') as f: | |
| content = f.read() | |
| if 'requires-python' in content and 'hatchling' in content: | |
| print(f' {project} - Modern pyproject.toml') | |
| modern_projects += 1 | |
| else: | |
| print(f' {project} - Basic pyproject.toml (needs enhancement)') | |
| modern_projects += 1 # Still counts as modern, just needs enhancement | |
| elif os.path.exists(requirements_path): | |
| print(f' {project} - Legacy requirements.txt only') | |
| legacy_projects += 1 |
🤖 Prompt for AI Agents
.github/scripts/analyze-dependencies.py around lines 23 to 37: the script prints
"Basic pyproject.toml (needs enhancement)" for some projects but never
increments any counter, so the total used for modernization rate is wrong;
either increment modern_projects or legacy_projects appropriately or,
preferably, add a new basic_projects counter, increment it when a project has a
basic pyproject.toml, and update the final modernization/total calculation to
include basic_projects (and update any printed summaries) so all projects are
counted.
| try: | ||
| with open(py_file, 'r', encoding='utf-8') as f: | ||
| content = f.read() | ||
|
|
||
| for pattern in secret_patterns: | ||
| matches = re.finditer(pattern, content, re.IGNORECASE) | ||
| for match in matches: | ||
| match_text = match.group() | ||
| if 'your_' not in match_text.lower() and 'example' not in match_text.lower(): | ||
| print(f'⚠ Potential hardcoded secret in {py_file}: {match_text[:50]}...') | ||
| issues_found += 1 | ||
| except Exception: | ||
| continue |
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Improve error handling and reporting detail.
The bare except Exception at line 37 silently suppresses all errors, which could hide issues like encoding problems or file access errors. Additionally, the output lacks line numbers and full context, making it harder to locate and verify findings.
Apply these improvements:
try:
with open(py_file, 'r', encoding='utf-8') as f:
- content = f.read()
+ lines = f.readlines()
for pattern in secret_patterns:
- matches = re.finditer(pattern, content, re.IGNORECASE)
- for match in matches:
- match_text = match.group()
- if 'your_' not in match_text.lower() and 'example' not in match_text.lower():
- print(f'⚠ Potential hardcoded secret in {py_file}: {match_text[:50]}...')
- issues_found += 1
- except Exception:
- continue
+ for line_num, line in enumerate(lines, 1):
+ matches = re.finditer(pattern, line, re.IGNORECASE)
+ for match in matches:
+ match_text = match.group()
+ if 'your_' not in match_text.lower() and 'example' not in match_text.lower():
+ print(f'⚠ {py_file}:{line_num} - Potential hardcoded secret: {match_text[:80]}')
+ issues_found += 1
+ except UnicodeDecodeError as e:
+ print(f'⚠ Warning: Could not read {py_file}: {e}')
+ except Exception as e:
+ print(f'⚠ Warning: Error processing {py_file}: {e}')📝 Committable suggestion
‼️ IMPORTANT
Carefully review the code before committing. Ensure that it accurately replaces the highlighted code, contains no missing lines, and has no issues with indentation. Thoroughly test & benchmark the code to ensure it meets the requirements.
| try: | |
| with open(py_file, 'r', encoding='utf-8') as f: | |
| content = f.read() | |
| for pattern in secret_patterns: | |
| matches = re.finditer(pattern, content, re.IGNORECASE) | |
| for match in matches: | |
| match_text = match.group() | |
| if 'your_' not in match_text.lower() and 'example' not in match_text.lower(): | |
| print(f'⚠ Potential hardcoded secret in {py_file}: {match_text[:50]}...') | |
| issues_found += 1 | |
| except Exception: | |
| continue | |
| try: | |
| with open(py_file, 'r', encoding='utf-8') as f: | |
| lines = f.readlines() | |
| for pattern in secret_patterns: | |
| for line_num, line in enumerate(lines, 1): | |
| matches = re.finditer(pattern, line, re.IGNORECASE) | |
| for match in matches: | |
| match_text = match.group() | |
| if 'your_' not in match_text.lower() and 'example' not in match_text.lower(): | |
| print(f'⚠ {py_file}:{line_num} - Potential hardcoded secret: {match_text[:80]}') | |
| issues_found += 1 | |
| except UnicodeDecodeError as e: | |
| print(f'⚠ Warning: Could not read {py_file}: {e}') | |
| except Exception as e: | |
| print(f'⚠ Warning: Error processing {py_file}: {e}') |
🤖 Prompt for AI Agents
In .github/scripts/check-hardcoded-secrets.py around lines 26 to 38, replace the
bare "except Exception" with targeted error handling and improve reporting:
catch and handle at least UnicodeDecodeError and OSError (or log any other
unexpected Exception but re-raise or log full traceback), and on file-read
failure log the filepath and exception details; when reporting potential secrets
include the exact line number and a small surrounding context/snippet (e.g., the
full matched line or +/- 40 characters) instead of a truncated 50-char slice so
reviewers can locate it quickly; ensure issues_found is incremented only for
valid matches and continue processing next files after logging the error.
| # Update .env.example if needed | ||
| if ($EnvQuality.Score -lt 70) { | ||
| Write-Log " Updating .env.example" | ||
| $NewEnvContent = New-EnhancedEnvExample -ProjectPath $ProjectPath -ProjectType $CategoryType | ||
| Set-Content -Path $EnvPath -Value $NewEnvContent -Encoding UTF8 | ||
| } |
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Write .env.example as UTF‑8 without BOM to avoid parser issues.
Some .env loaders choke on BOM. Replace Set-Content with BOM‑less write.
- $NewEnvContent = New-EnhancedEnvExample -ProjectPath $ProjectPath -ProjectType $CategoryType
- Set-Content -Path $EnvPath -Value $NewEnvContent -Encoding UTF8
+ $NewEnvContent = New-EnhancedEnvExample -ProjectPath $ProjectPath -ProjectType $CategoryType
+ $utf8NoBom = New-Object System.Text.UTF8Encoding($false)
+ [System.IO.File]::WriteAllText($EnvPath, $NewEnvContent, $utf8NoBom)🤖 Prompt for AI Agents
In .github/scripts/standardize-documentation.ps1 around lines 331 to 336, the
code uses Set-Content -Encoding UTF8 which may write a BOM and break some .env
parsers; replace that call with a BOM-less UTF‑8 write (for example use
[System.IO.File]::WriteAllText($EnvPath, $NewEnvContent,
[System.Text.Encoding]::UTF8) or explicitly new System.Text.UTF8Encoding($false)
to create a UTF8 encoding without BOM) so the .env.example is written as UTF‑8
without a BOM.
| if (-not (Test-Path $PyProjectPath) -and (Test-Path $RequirementsPath)) { | ||
| Write-Log " Creating pyproject.toml" | ||
| # This would be implemented with a more complex conversion | ||
| # For now, just note that it needs manual attention | ||
| Write-Log " NOTE: pyproject.toml creation needs manual review" "WARNING" | ||
| } |
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Misleading log: no pyproject is created.
Adjust wording to reflect current behavior.
- Write-Log " Creating pyproject.toml"
- # This would be implemented with a more complex conversion
- # For now, just note that it needs manual attention
- Write-Log " NOTE: pyproject.toml creation needs manual review" "WARNING"
+ Write-Log " Skipping automatic pyproject.toml creation; conversion from requirements.txt needs manual review" "WARNING"🤖 Prompt for AI Agents
.github/scripts/standardize-documentation.ps1 around lines 339 to 344: the log
currently prints "Creating pyproject.toml" but no file is actually created,
which is misleading; change the first Write-Log call to a clear message that no
pyproject.toml was created and that manual creation/review is required (e.g.,
"pyproject.toml not created; manual creation/review required") and keep or
escalate the subsequent NOTE warning so logs accurately reflect the script's
behavior.
| ```powershell | ||
| # migrate-to-uv.ps1 | ||
| param( | ||
| [Parameter(Mandatory=$true)] | ||
| [string]$ProjectPath, | ||
| [Parameter(Mandatory=$true)] | ||
| [string]$ProjectName, | ||
| [string]$Description = "AI agent application" | ||
| ) | ||
| $projectToml = @" | ||
| [project] | ||
| name = "$ProjectName" | ||
| version = "0.1.0" | ||
| description = "$Description" | ||
| authors = [ | ||
| {name = "Arindam Majumder", email = "[email protected]"} | ||
| ] | ||
| readme = "README.md" | ||
| requires-python = ">=3.10" | ||
| license = {text = "MIT"} | ||
| dependencies = [ | ||
| "@ | ||
| # Read existing requirements.txt and convert | ||
| if (Test-Path "$ProjectPath/requirements.txt") { | ||
| $requirements = Get-Content "$ProjectPath/requirements.txt" | Where-Object { $_ -and !$_.StartsWith("#") } | ||
| foreach ($req in $requirements) { | ||
| $req = $req.Trim() | ||
| if ($req) { | ||
| # Add basic version constraints | ||
| if (!$req.Contains("=") -and !$req.Contains(">") -and !$req.Contains("<")) { | ||
| $projectToml += "`n `"$req>=0.1.0`"," | ||
| } else { | ||
| $projectToml += "`n `"$req`"," | ||
| } | ||
| } | ||
| } | ||
| } | ||
| $projectToml += @" | ||
| ] | ||
| [project.urls] | ||
| Homepage = "https://github.com/Arindam200/awesome-ai-apps" | ||
| Repository = "https://github.com/Arindam200/awesome-ai-apps" | ||
| [build-system] | ||
| requires = ["hatchling"] | ||
| build-backend = "hatchling.build" | ||
| "@ | ||
| # Write pyproject.toml | ||
| $projectToml | Out-File -FilePath "$ProjectPath/pyproject.toml" -Encoding utf8 | ||
| Write-Host "Created pyproject.toml for $ProjectName" | ||
| Write-Host "Please review and adjust version constraints manually" | ||
| ``` |
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Migration script default version constraint contradicts guide recommendations.
The PowerShell script at line 293 adds >=0.1.0 as a default version constraint when none exists in requirements.txt. This is overly permissive and contradicts the guide's own version pinning strategy (lines 179-202) which recommends major version constraints like >=X.Y.Z,<(X+1).0.0.
The script should either:
- Leave dependencies without constraints and warn the user to add them manually, or
- Attempt to query the current installed version and apply major version constraints
if (!$req.Contains("=") -and !$req.Contains(">") -and !$req.Contains("<")) {
- $projectToml += "`n `"$req>=0.1.0`","
+ # No version specified - require manual review
+ $projectToml += "`n `"$req`", # TODO: Add version constraints"
+ Write-Warning " No version constraint for $req - please add manually"
} else {Alternatively, add a note that this script generates a basic template that requires manual review and version constraint updates per the guide's recommendations.
🤖 Prompt for AI Agents
In .github/standards/UV_MIGRATION_GUIDE.md around lines 257 to 319 the
PowerShell migration script unconditionally appends a default ">=0.1.0"
constraint (line ~293), which conflicts with the guide's recommended
major-version pinning; update the script so it does not inject ">=0.1.0" by
default — either (A) append just the package name with no constraint and emit a
clear warning/listing of packages that need manual version pinning (write the
warning to the console after reading requirements.txt), or (B) attempt to read
the currently installed version (e.g. pip show or reading the environment) and
construct a major-version constraint of the form ">=X.Y.Z,<(X+1).0.0" before
adding it; also add a short note in the script output that the generated
pyproject.toml is a template requiring manual review per the guide.
| # Support: | ||
| # - Documentation: https://docs.agno.com | ||
| # - Issues: https://github.com/Arindam200/awesome-ai-apps/issues | ||
| # - Community: Join discussions in GitHub issues |
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Add blank line at end of file.
The file is missing a trailing newline, which is flagged by dotenv-linter and is a common convention in text files to ensure proper parsing and git diffs.
Add a blank line at the end of the file.
🧰 Tools
🪛 dotenv-linter (4.0.0)
[warning] 99-99: [EndingBlankLine] No blank line at the end of the file
(EndingBlankLine)
🤖 Prompt for AI Agents
In starter_ai_agents/agno_starter/.env.example around line 99, the file is
missing a trailing newline; add a single blank line (newline character) at the
end of the file so the file ends with an empty line to satisfy dotenv-linter and
standard text-file conventions.
| def create_agent() -> Optional[object]: | ||
| """Create and configure the HackerNews analyst agent. | ||
| Returns: | ||
| Agent: Configured agent ready for tech news analysis, or None if dependencies unavailable |
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Fix return type and docstring to match implementation.
The function signature indicates Optional[object] and the docstring states "or None if dependencies unavailable", but the function never returns None. It either returns an agent or raises an exception.
Apply this diff:
-def create_agent() -> Optional[object]:
+def create_agent() -> object:
"""Create and configure the HackerNews analyst agent.
Returns:
- Agent: Configured agent ready for tech news analysis, or None if dependencies unavailable
+ object: Configured agent ready for tech news analysis
Raises:
ValueError: If NEBIUS_API_KEY is not found in environment
RuntimeError: If agno framework is not available
"""📝 Committable suggestion
‼️ IMPORTANT
Carefully review the code before committing. Ensure that it accurately replaces the highlighted code, contains no missing lines, and has no issues with indentation. Thoroughly test & benchmark the code to ensure it meets the requirements.
| def create_agent() -> Optional[object]: | |
| """Create and configure the HackerNews analyst agent. | |
| Returns: | |
| Agent: Configured agent ready for tech news analysis, or None if dependencies unavailable | |
| def create_agent() -> object: | |
| """Create and configure the HackerNews analyst agent. | |
| Returns: | |
| object: Configured agent ready for tech news analysis | |
| Raises: | |
| ValueError: If NEBIUS_API_KEY is not found in environment | |
| RuntimeError: If agno framework is not available | |
| """ |
🤖 Prompt for AI Agents
In starter_ai_agents/agno_starter/main.py around lines 78 to 82, the function
signature and docstring are inconsistent with the implementation: the signature
uses Optional[object] and the docstring says "or None if dependencies
unavailable" but the function never returns None and instead raises on failure.
Update the type hint to a non-optional return type (e.g., -> object or the
concrete Agent type used in this module) and revise the docstring to state it
returns a configured Agent and that it raises an exception on failure (remove
the "or None" clause).
| # ============================================================================= | ||
| # crewai_starter - Environment Configuration | ||
| # ============================================================================= | ||
| # Copy this file to .env and fill in your actual values | ||
| # IMPORTANT: Never commit .env files to version control | ||
|
|
||
| # ============================================================================= | ||
| # Required Configuration | ||
| # ============================================================================= | ||
|
|
||
| # Nebius AI API Key (Required) | ||
| # Description: Primary LLM provider for the application | ||
| # Get your key: https://studio.nebius.ai/api-keys | ||
| # Free tier: 100 requests/minute | ||
| NEBIUS_API_KEY="your_nebius_api_key_here" | ||
|
|
||
| # ============================================================================= | ||
| # Optional Configuration | ||
| # ============================================================================= | ||
|
|
||
| # OpenAI API Key (Optional - Alternative LLM provider) | ||
| # Get your key: https://platform.openai.com/account/api-keys | ||
| # OPENAI_API_KEY="your_openai_api_key_here" | ||
|
|
||
| # ============================================================================= | ||
| # Development Settings | ||
| # ============================================================================= | ||
|
|
||
| # Debug Mode (Optional) | ||
| # DEBUG="true" | ||
|
|
||
| # Log Level (Optional) | ||
| # LOG_LEVEL="INFO" | ||
|
|
||
| # ============================================================================= | ||
| # Getting Started | ||
| # ============================================================================= | ||
| # 1. Copy this file: cp .env.example .env | ||
| # 2. Get a Nebius API key from https://studio.nebius.ai/api-keys | ||
| # 3. Replace "your_nebius_api_key_here" with your actual key | ||
| # 4. Save the file and run the application | ||
| # | ||
| # Support: https://github.com/Arindam200/awesome-ai-apps/issues |
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Excellent template structure with one encoding issue.
The comprehensive documentation and clear organization make this an exemplary environment configuration template. However, the file contains a UTF-8 BOM that should be removed (same issue as advance_ai_agents/deep_researcher_agent/.env.example).
To fix the BOM issue, save the file without BOM encoding. Most editors have this option in their save/encoding settings.
🧰 Tools
🪛 dotenv-linter (4.0.0)
[warning] 1-1: [LeadingCharacter] Invalid leading character detected
(LeadingCharacter)
[warning] 15-15: [QuoteCharacter] The value has quote characters (', ")
(QuoteCharacter)
🤖 Prompt for AI Agents
In starter_ai_agents/crewai_starter/.env.example around lines 1 to 43, the file
includes a UTF-8 BOM which can cause parsing issues; open the file in an editor
and re-save it using "UTF-8 without BOM" (or "UTF-8 (no BOM)") encoding so the
leading BOM byte sequence is removed, then verify the first character is the '#'
and commit the updated file.
| @@ -0,0 +1,25 @@ | |||
| [project] | |||
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Remove the BOM (Byte Order Mark) character.
The file starts with a BOM character (), which can cause issues with TOML parsers and other tools.
Save the file with UTF-8 encoding without BOM.
🤖 Prompt for AI Agents
In starter_ai_agents/crewai_starter/pyproject.toml around lines 1 to 1 there is
a leading BOM character (displayed as ) at the top of the file; remove the BOM
by resaving the file as UTF-8 without BOM (use your editor’s “Save with
encoding” or run a tool to strip the BOM), ensuring the first byte is the '[' of
"[project]" and then commit the cleaned file.
| @@ -0,0 +1,6 @@ | |||
| # langchain_langgraph_starter Environment Configuration | |||
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Remove the BOM (Byte Order Mark) character.
The file contains a BOM character at the beginning (detected as by static analysis), which can cause parsing issues with some environment variable loaders and shell scripts.
Save the file with UTF-8 encoding without BOM.
🧰 Tools
🪛 dotenv-linter (4.0.0)
[warning] 1-1: [IncorrectDelimiter] The # langchain_langgraph_starter Environment Configuration key has incorrect delimiter
(IncorrectDelimiter)
[warning] 1-1: [KeyWithoutValue] The # langchain_langgraph_starter Environment Configuration key should be with a value or have an equal sign
(KeyWithoutValue)
[warning] 1-1: [LeadingCharacter] Invalid leading character detected
(LeadingCharacter)
[warning] 1-1: [LowercaseKey] The # langchain_langgraph_starter Environment Configuration key should be in uppercase
(LowercaseKey)
🤖 Prompt for AI Agents
In starter_ai_agents/langchain_langgraph_starter/.env.example around lines 1 to
1, the file begins with a BOM (Byte Order Mark) character which can break env
loaders; remove the leading BOM and save the file using UTF-8 without BOM
encoding (e.g., in your editor choose "UTF-8 without BOM" or run a tool/command
to strip the BOM) so the first character is the `#` of the comment.
- Remove unused imports (List, os, re, sys, subprocess) - Fix continuation line indentation (E128) - Fix long lines (E501) by breaking them appropriately - Remove unused variable 'nebius_added' (F841) - Add proper spacing around arithmetic operators (E226) - Add 2 blank lines before class definition (E302) All syntax checks now pass.
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Actionable comments posted: 6
🧹 Nitpick comments (4)
.github/tools/comprehensive_code_quality_fixer.py (4)
205-232: Env example enhancer is over‑eager and brand‑specific.
- Triggers on most files; overwrites structure and comments.
- Hardcodes Nebius/OpenAI links; may not apply to all projects.
Add opt‑in guard (marker comment), preserve original comments, and make providers configurable.Proposed adjustments:
- Only enhance when file contains a marker (e.g., “# enhance:env-example”).
- Parse/retain existing header comments.
- Inject provider blocks via a template with placeholders (provider name/links from CLI flags or config).
Would you like a patch adding a --provider-template path and an opt‑in marker?Also applies to: 233-363
53-55: Skip vendor/build directories to avoid unintended edits.Exclude .git, pycache, venv/.venv, node_modules, dist, build, etc.
- python_files = list(self.project_path.rglob("*.py")) + def _is_ignored(p: Path) -> bool: + banned = {".git", "__pycache__", "venv", ".venv", "node_modules", "dist", "build"} + return any(part in banned for part in p.parts) + python_files = [p for p in self.project_path.rglob("*.py") if not _is_ignored(p)]Apply similarly in all three methods.
Also applies to: 98-100, 374-376
485-486: Use sys.exit (or SystemExit) for scripts.exit() is for interactive use. Prefer sys.exit or raising SystemExit.
-if __name__ == "__main__": - exit(main()) +if __name__ == "__main__": + import sys + sys.exit(main())
34-41: Log file location is fixed; consider project‑scoped path.Write logs under project_path to keep artifacts contained.
- logging.FileHandler('code_quality_fixes.log', encoding='utf-8'), + logging.FileHandler(str(self.project_path / 'code_quality_fixes.log'), encoding='utf-8'),
| @@ -0,0 +1,486 @@ | |||
| #!/usr/bin/env python3 | |||
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BOM before shebang breaks executability.
File starts with a UTF‑8 BOM, so the kernel won’t recognize the shebang. Remove BOM so the file is runnable via ./script.
Apply:
-#!/usr/bin/env python3
+#!/usr/bin/env python3📝 Committable suggestion
‼️ IMPORTANT
Carefully review the code before committing. Ensure that it accurately replaces the highlighted code, contains no missing lines, and has no issues with indentation. Thoroughly test & benchmark the code to ensure it meets the requirements.
| #!/usr/bin/env python3 | |
| #!/usr/bin/env python3 |
🤖 Prompt for AI Agents
.github/tools/comprehensive_code_quality_fixer.py around line 1 contains a UTF-8
BOM before the shebang which prevents the kernel from recognizing the shebang;
remove the BOM so the file starts with "#!/usr/bin/env python3" as the first
byte sequence — re-save the file encoded as UTF-8 without BOM (or strip the BOM
bytes) so the script is executable via ./script.
| def _setup_logging(self) -> logging.Logger: | ||
| """Setup logging configuration.""" | ||
| logging.basicConfig( | ||
| level=logging.INFO, | ||
| format='%(asctime)s - %(name)s - %(levelname)s - %(message)s', | ||
| handlers=[ | ||
| logging.FileHandler('code_quality_fixes.log'), | ||
| logging.StreamHandler() | ||
| ] | ||
| ) | ||
| return logging.getLogger(__name__) |
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🛠️ Refactor suggestion | 🟠 Major
Verbose flag ineffective; logging configured after level set.
basicConfig in _setup_logging resets root to INFO after you set DEBUG. Move the level change to after handlers are created; also set file handler encoding.
@@ def _setup_logging(self) -> logging.Logger:
- logging.basicConfig(
+ logging.basicConfig(
level=logging.INFO,
format='%(asctime)s - %(name)s - %(levelname)s - %(message)s',
handlers=[
- logging.FileHandler('code_quality_fixes.log'),
+ logging.FileHandler('code_quality_fixes.log', encoding='utf-8'),
logging.StreamHandler()
]
)
return logging.getLogger(__name__)
@@ def main():
- # Setup logging level
- if args.verbose:
- logging.getLogger().setLevel(logging.DEBUG)
-
- # Run fixes
- fixer = ComprehensiveCodeQualityFixer(args.project_path, dry_run=args.dry_run)
+ # Instantiate and then adjust level so basicConfig doesn't overwrite it
+ fixer = ComprehensiveCodeQualityFixer(args.project_path, dry_run=args.dry_run)
+ if args.verbose:
+ logging.getLogger().setLevel(logging.DEBUG)
results = fixer.run_all_fixes()Also applies to: 460-466
🤖 Prompt for AI Agents
.github/tools/comprehensive_code_quality_fixer.py around lines 32 to 42 (and
similarly lines 460-466): basicConfig currently sets level=logging.INFO which
overrides any earlier DEBUG setting and doesn't set file handler encoding;
instead create handlers first (FileHandler with explicit encoding='utf-8' and
StreamHandler), configure their formatters, add them to the root or module
logger, and then set the logger level to the desired level (e.g., logging.DEBUG)
after handlers are attached; remove the level parameter from basicConfig or
avoid basicConfig entirely and set levels on the logger and handlers explicitly
so the verbose flag takes effect.
| if fixed_lines and not content.endswith('\n'): | ||
| content = '\n'.join(fixed_lines) + '\n' | ||
| else: | ||
| content = '\n'.join(fixed_lines) | ||
|
|
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W292 logic drops the final newline.
After splitlines(), join() removes the terminal newline even when the file originally had one. Always write exactly one trailing newline.
Apply:
- # Ensure file ends with newline (W292)
- if fixed_lines and not content.endswith('\n'):
- content = '\n'.join(fixed_lines) + '\n'
- else:
- content = '\n'.join(fixed_lines)
+ # Ensure exactly one trailing newline (W292)
+ content = '\n'.join(fixed_lines) + '\n'🤖 Prompt for AI Agents
.github/tools/comprehensive_code_quality_fixer.py around lines 68 to 72: the
current conditional can drop the terminal newline after join(), so always ensure
exactly one trailing newline; replace the if/else with a single assignment that
sets content = '\n'.join(fixed_lines) + '\n' (so files always end with one
newline, even when fixed_lines is empty or when the original had a trailing
newline).
| # Find all Python files | ||
| python_files = list(self.project_path.rglob("*.py")) | ||
|
|
||
| for file_path in python_files: | ||
| try: | ||
| with open(file_path, 'r', encoding='utf-8') as f: | ||
| content = f.read() | ||
|
|
||
| original_content = content | ||
|
|
||
| # Use a simple import sorter | ||
| fixed_content = self._sort_imports(content) | ||
|
|
||
| if fixed_content != original_content: | ||
| if not self.dry_run: | ||
| with open(file_path, 'w', encoding='utf-8') as f: | ||
| f.write(fixed_content) | ||
| self.logger.info(f"Fixed import sorting in {file_path}") | ||
| else: | ||
| self.logger.info(f"Would fix import sorting in {file_path}") | ||
| files_fixed += 1 | ||
|
|
||
| except Exception as e: | ||
| self.logger.error(f"Error fixing imports in {file_path}: {e}") | ||
|
|
||
| self.fixes_applied.append(f"Fixed import sorting in {files_fixed} files") | ||
| return files_fixed | ||
|
|
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🧩 Analysis chain
Custom import sorter is unsafe; can break code and deletes comments.
- May reorder past “from future import …” (semantic change).
- Misclassifies stdlib (hardcoded list).
- Drops inline/comments within the import block.
Use a proven tool (ruff/isort) and preserve comments.
Minimal change: prefer isort when available; fallback to current sorter.
@@ def fix_import_sorting_issues(self) -> int:
- # Use a simple import sorter
- fixed_content = self._sort_imports(content)
+ # Prefer isort (if available); fallback to simple sorter
+ try:
+ from isort import api as _isort_api # type: ignore
+ fixed_content = _isort_api.sort_code_string(content)
+ except Exception:
+ fixed_content = self._sort_imports(content)Add import (top of file):
# add near other imports
# (no-op if isort not installed; try/except inside method guards usage)Verification (find files with future imports likely to be impacted):
Also applies to: 126-194
🏁 Script executed:
#!/bin/bash
rg -nP --type=py -C2 '^\s*from\s+__future__\s+import\s+' || trueLength of output: 188
I'll verify the concerns by examining the sorter implementation and checking for potential issues in the codebase.
</parameter>
🏁 Script executed:
#!/bin/bash
# Find the _sort_imports method implementation
rg -nPU '(?s)def _sort_imports\(' .github/tools/comprehensive_code_quality_fixer.py -A 30Length of output: 1074
🏁 Script executed:
#!/bin/bash
# Check for comments within import blocks across codebase
rg -nP --type=py '(?s)^(from|import)\s+.*#.*$' -C1Length of output: 149
🏁 Script executed:
#!/bin/bash
# Check project dependencies for isort/ruff
fd -e txt -e toml -e cfg \( -name 'requirements*.txt' -o -name 'setup.py' -o -name 'pyproject.toml' \) -x cat {}Length of output: 230
🏁 Script executed:
#!/bin/bash
# Verify if any imports are being reordered incorrectly by checking stdlib classification
rg -nP --type=py -C2 '^\s*(import|from)\s+(sys|os|pathlib|collections)' .github/tools/comprehensive_code_quality_fixer.py | head -20Length of output: 85
🏁 Script executed:
#!/bin/bash
# Look at the overall structure of comprehensive_code_quality_fixer.py to understand sorting logic
head -150 .github/tools/comprehensive_code_quality_fixer.py | tail -100Length of output: 3592
I need to see the complete _sort_imports() implementation to verify the concerns about __future__ handling, comment preservation, and stdlib classification.
</parameter>
🏁 Script executed:
#!/bin/bash
# Get complete _sort_imports implementation
rg -nPU '(?s)def _sort_imports\(' .github/tools/comprehensive_code_quality_fixer.py -A 80Length of output: 3044
🏁 Script executed:
#!/bin/bash
# Check for hardcoded stdlib list in the file
rg -nP '(stdlib|STDLIB|standard.*library)' .github/tools/comprehensive_code_quality_fixer.py -C2Length of output: 195
🏁 Script executed:
#!/bin/bash
# Find requirements/dependencies files with correct syntax
find . -maxdepth 3 \( -name 'requirements*.txt' -o -name 'setup.py' -o -name 'pyproject.toml' -o -name 'setup.cfg' \) 2>/dev/null | head -10Length of output: 586
🏁 Script executed:
#!/bin/bash
# Check if the sorter explicitly handles __future__ imports
rg -nP '__future__' .github/tools/comprehensive_code_quality_fixer.pyLength of output: 0
Use proven import sorter (isort/ruff) to prevent breaking future imports and dropping comments.
The review concerns are verified as legitimate bugs in the implementation:
-
__future__imports will be reordered (PEP 236 violation): The hardcoded stdlib list at lines 164–165 does not include__future__, sofrom __future__ importstatements will be misclassified as third-party imports and moved after other imports. This breaks code semantics. Confirmed: codebase containsfrom __future__ import annotationsthat would be affected. -
Incomplete stdlib classification: Only 8 modules are recognized (
os,sys,json,urllib,http,pathlib,typing,re,logging,ast). Common stdlib modules likecollections,itertools,datetime,subprocess, andthreadingare missing and incorrectly classified as third-party. -
Standalone comments within import blocks are dropped: Line 158 skips lines starting with
#during processing, losing block-internal comments. Inline comments are preserved but re-sorted with their imports.
Recommended fix: Adopt isort (or ruff) with fallback:
@@ def fix_import_sorting_issues(self) -> int:
- # Use a simple import sorter
- fixed_content = self._sort_imports(content)
+ # Prefer isort (if available); fallback to simple sorter
+ try:
+ from isort import api as _isort_api # type: ignore
+ fixed_content = _isort_api.sort_code_string(content)
+ except Exception:
+ fixed_content = self._sort_imports(content)| for line in lines: | ||
| # Fix mixed tabs and spaces | ||
| if '\t' in line: | ||
| # Convert tabs to 4 spaces | ||
| fixed_line = line.expandtabs(4) | ||
| fixed_lines.append(fixed_line) | ||
| else: | ||
| fixed_lines.append(line) | ||
|
|
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Tab normalization changes string contents.
expandtabs() on the entire line alters tabs inside string literals/comments. Only convert leading indentation.
- for line in lines:
- # Fix mixed tabs and spaces
- if '\t' in line:
- # Convert tabs to 4 spaces
- fixed_line = line.expandtabs(4)
- fixed_lines.append(fixed_line)
- else:
- fixed_lines.append(line)
+ for line in lines:
+ # Only convert tabs in leading indentation
+ leading = line[:len(line) - len(line.lstrip(' \t'))]
+ if '\t' in leading:
+ leading = leading.expandtabs(4)
+ fixed_lines.append(leading + line[len(leading):])
+ else:
+ fixed_lines.append(line)Committable suggestion skipped: line range outside the PR's diff.
🤖 Prompt for AI Agents
.github/tools/comprehensive_code_quality_fixer.py around lines 389 to 397:
current code calls expandtabs() on the whole line which alters tabs inside
string literals and comments; change it to only normalize leading indentation by
isolating the leading whitespace (e.g., with a regex or by scanning from the
start until first non-whitespace char), run expandtabs(4) or replace leading
tabs with 4 spaces on that leading segment, then recombine with the rest of the
line so tabs inside strings/comments remain unchanged.
| print("\n" + "=" * 60) | ||
| print("COMPREHENSIVE CODE QUALITY FIXES SUMMARY") | ||
| print("=" * 60) | ||
| print(f"Trailing whitespace fixes: {results['trailing_whitespace_fixes']}") | ||
| print(f"Import sorting fixes: {results['import_sorting_fixes']}") | ||
| print(f"Environment documentation fixes: {results['env_documentation_fixes']}") | ||
| print(f"Security/indentation fixes: {results['security_fixes']}") | ||
| print(f"Total fixes applied: {results['total_fixes']}") | ||
|
|
||
| if results['fixes_applied']: | ||
| print("\nFixes Applied:") | ||
| for fix in results['fixes_applied']: | ||
| print(f" Γ£ô {fix}") | ||
|
|
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Garbled bullet character in summary.
"Γ£ô" looks like a mis‑decoded bullet. Use ASCII “-” or “•”.
- print(f" Γ£ô {fix}")
+ print(f" - {fix}")🤖 Prompt for AI Agents
.github/tools/comprehensive_code_quality_fixer.py around lines 468 to 481: the
summary print loop uses a garbled bullet string "Γ£ô" (likely an encoding
artifact); replace that literal with a plain ASCII hyphen "-" (or a proper
bullet "•" if UTF-8 output is guaranteed) in the f-string (e.g. print(f" -
{fix}")), and ensure the file is saved/committed with UTF-8 encoding to avoid
future mis-decoding.
|
changes made |
Related to issue #77
🔗 Linked Issue
Closes #
✅ Type of Change
📝 Summary
📖 README Checklist
README.mdfile for my project.README.mdfollows the official.github/README_TEMPLATE.md.README.md.assetsfolder and included it in myREADME.md.✔️ Contributor Checklist
advance_ai_agents,rag_apps).requirements.txtorpyproject.tomlfor dependencies..env.examplefile if environment variables are needed and ensured no secrets are committed.💬 Additional Comments
Summary by CodeRabbit
New Features
Documentation
Chores