fix annotations that are reported as missing after tokenization #16
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This PR fixes which annotations are reported as missing after tokenization. When
tokenize_document()
returns multiple documents because of partitioning or windowing, the annotations are distributed on the respective result documents. This means, that each result document may lack some annotations but these may be still covered by other result docs. With this PR, we only report the annotations as missing that are not added to any of the result documents (e.g. spans because of alignment errors or relations because their arguments are in different result documents).This requires: ArneBinder/pytorch-ie#390 (i.e.
pytorch-ie>=0.29.4
)