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[Feature]: Add alignment and cigar getters #42

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[Feature]: Add alignment and cigar getters #42

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Commits on Apr 9, 2023

  1. feat: Add _cigar(::Variation) function 

    Add a function that can convert the information contained in an
Insertion or a Deletion into a CIGAR operator.
    @MillironX
    MillironX committed Apr 9, 2023
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  2. feat: Add _cigar_between(::Variation, ::Variation) function 

    Add a function that can calculate the matching bases between two
(non-matching) Variations and return a matching (M) CIGAR operation
    @MillironX
    MillironX committed Apr 9, 2023
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  3. feat: Add cigar(::Haplotype) function

    @MillironX
    MillironX committed Apr 9, 2023
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  4. test: Add tests for cigar(::Haplotype)

    @MillironX
    MillironX committed Apr 9, 2023
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  5. feat: Add alignment(::Haplotype) function

    @MillironX
    MillironX committed Apr 9, 2023
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  6. test: Add test for alignment(::Haplotype)

    @MillironX
    MillironX committed Apr 9, 2023
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  7. docs: Rename 'Variants' header to 'Haplotypes'

    @MillironX
    MillironX committed Apr 9, 2023
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  8. docs: Add autodocs for alignment

    @MillironX
    MillironX committed Apr 9, 2023
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  9. docs: Add autodocs for cigar

    @MillironX
    MillironX committed Apr 9, 2023
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  10. docs: Add examples of alignment getters

    @MillironX
    MillironX committed Apr 9, 2023
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  11. chore: Update CHANGELOG

    @MillironX
    MillironX committed Apr 9, 2023
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