fix index open, fix tests #308
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| name: C/C++ CI | |
| on: | |
| push: | |
| branches: [ '**' ] | |
| pull_request: | |
| branches: [ '**' ] | |
| jobs: | |
| ubuntu_16: | |
| name: Ubuntu 16 | |
| runs-on: ubuntu-22.04 | |
| container: ubuntu:16.04 | |
| steps: | |
| - name: install git | |
| run: apt-get update && apt-get install -y software-properties-common && add-apt-repository ppa:git-core/ppa && apt-get update -y && apt-get install git -y | |
| - uses: actions/checkout@v2 | |
| with: | |
| submodules: recursive | |
| - name: install packages | |
| run: apt-get update && apt-get install -y zlib1g-dev gcc libcurl4-openssl-dev valgrind make | |
| - name: build | |
| run: make slow5_mt=1 | |
| - name: test | |
| run: make test | |
| ubuntu_18: | |
| name: Ubuntu 18 | |
| runs-on: ubuntu-22.04 | |
| container: ubuntu:18.04 | |
| steps: | |
| - name: install git | |
| run: apt-get update && apt-get install -y software-properties-common && add-apt-repository ppa:git-core/ppa && apt-get update -y && apt-get install git -y | |
| - uses: actions/checkout@v2 | |
| with: | |
| submodules: recursive | |
| - name: install packages | |
| run: apt-get update && apt-get install -y zlib1g-dev gcc libcurl4-openssl-dev valgrind make | |
| - name: build | |
| run: make slow5_mt=1 | |
| - name: test | |
| run: make test | |
| ubuntu_20: | |
| name: Ubuntu 20 | |
| runs-on: ubuntu-20.04 | |
| steps: | |
| - uses: actions/checkout@v2 | |
| with: | |
| submodules: recursive | |
| - name: install packages | |
| run: sudo apt-get update && sudo apt-get install -y zlib1g-dev gcc libcurl4-openssl-dev valgrind | |
| - name: build | |
| run: make slow5_mt=1 | |
| - name: test | |
| run: make test | |
| ubuntu_22: | |
| name: Ubuntu 22 | |
| runs-on: ubuntu-22.04 | |
| steps: | |
| - uses: actions/checkout@v2 | |
| with: | |
| submodules: recursive | |
| - name: install packages | |
| run: sudo apt-get update && sudo apt-get install -y zlib1g-dev gcc libcurl4-openssl-dev valgrind | |
| - name: build | |
| run: make slow5_mt=1 | |
| - name: test | |
| run: make test | |
| - name: mem | |
| run: make mem | |
| - name: examples | |
| run: make examples | |
| os_x: | |
| name: OSX | |
| runs-on: macos-latest | |
| steps: | |
| - uses: actions/checkout@v2 | |
| with: | |
| submodules: recursive | |
| - name: install packages | |
| run: brew install curl | |
| - name: build | |
| run: make slow5_mt=1 | |
| - name: test | |
| run: make test | |
| - name: examples | |
| run: make examples |