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test: Add test coverage for BMI categorization in case service #17

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iamkaroko merged 1 commit into from
Nov 19, 2025
Merged

test: Add test coverage for BMI categorization in case service #17

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197 changes: 197 additions & 0 deletions tests/cases/service/case_service_test.py
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Original file line number Diff line number Diff line change
Expand Up @@ -885,6 +885,203 @@ def test_get_value_of_measurement_with_unit_source_value(self, mocker):
# then
assert value == "test 44 test"

def test_get_value_of_measurement_with_bmi_underweight(self, mocker):
# Given
(
concept_repository,
configuration_repository,
drug_exposure_repository,
measurement_repository,
observation_repository,
person_repository,
visit_occurrence_repository,
system_config_repository,
diagnosis_repository,
) = mock_repos(mocker)

case_service = CaseService(
visit_occurrence_repository=visit_occurrence_repository,
concept_repository=concept_repository,
measurement_repository=measurement_repository,
observation_repository=observation_repository,
person_repository=person_repository,
drug_exposure_repository=drug_exposure_repository,
configuration_repository=configuration_repository,
system_config_repository=system_config_repository,
diagnose_repository=diagnosis_repository,
)
# BMI concept_id is 40490382
measurement_bmi_underweight = measurement_fixture(
concept_id=40490382,
value_as_number=18,
measurement_id=4,
person_id=1,
visit_id=1,
)

# when
value = case_service.get_value_of_measurement(measurement_bmi_underweight)

# then
assert value == "Underweight"

def test_get_value_of_measurement_with_bmi_normal(self, mocker):
# Given
(
concept_repository,
configuration_repository,
drug_exposure_repository,
measurement_repository,
observation_repository,
person_repository,
visit_occurrence_repository,
system_config_repository,
diagnosis_repository,
) = mock_repos(mocker)

case_service = CaseService(
visit_occurrence_repository=visit_occurrence_repository,
concept_repository=concept_repository,
measurement_repository=measurement_repository,
observation_repository=observation_repository,
person_repository=person_repository,
drug_exposure_repository=drug_exposure_repository,
configuration_repository=configuration_repository,
system_config_repository=system_config_repository,
diagnose_repository=diagnosis_repository,
)
measurement_bmi_normal = measurement_fixture(
concept_id=40490382,
value_as_number=22,
measurement_id=5,
person_id=1,
visit_id=1,
)

# when
value = case_service.get_value_of_measurement(measurement_bmi_normal)

# then
assert value == "Normal"

def test_get_value_of_measurement_with_bmi_overweight(self, mocker):
# Given
(
concept_repository,
configuration_repository,
drug_exposure_repository,
measurement_repository,
observation_repository,
person_repository,
visit_occurrence_repository,
system_config_repository,
diagnosis_repository,
) = mock_repos(mocker)

case_service = CaseService(
visit_occurrence_repository=visit_occurrence_repository,
concept_repository=concept_repository,
measurement_repository=measurement_repository,
observation_repository=observation_repository,
person_repository=person_repository,
drug_exposure_repository=drug_exposure_repository,
configuration_repository=configuration_repository,
system_config_repository=system_config_repository,
diagnose_repository=diagnosis_repository,
)
measurement_bmi_overweight = measurement_fixture(
concept_id=40490382,
value_as_number=27,
measurement_id=6,
person_id=1,
visit_id=1,
)

# when
value = case_service.get_value_of_measurement(measurement_bmi_overweight)

# then
assert value == "Overweight"

def test_get_value_of_measurement_with_bmi_obese(self, mocker):
# Given
(
concept_repository,
configuration_repository,
drug_exposure_repository,
measurement_repository,
observation_repository,
person_repository,
visit_occurrence_repository,
system_config_repository,
diagnosis_repository,
) = mock_repos(mocker)

case_service = CaseService(
visit_occurrence_repository=visit_occurrence_repository,
concept_repository=concept_repository,
measurement_repository=measurement_repository,
observation_repository=observation_repository,
person_repository=person_repository,
drug_exposure_repository=drug_exposure_repository,
configuration_repository=configuration_repository,
system_config_repository=system_config_repository,
diagnose_repository=diagnosis_repository,
)
measurement_bmi_obese = measurement_fixture(
concept_id=40490382,
value_as_number=30,
measurement_id=7,
person_id=1,
visit_id=1,
)

# when
value = case_service.get_value_of_measurement(measurement_bmi_obese)

# then
assert value == "Obese"

def test_get_value_of_measurement_with_bmi_unknown(self, mocker):
# Given
(
concept_repository,
configuration_repository,
drug_exposure_repository,
measurement_repository,
observation_repository,
person_repository,
visit_occurrence_repository,
system_config_repository,
diagnosis_repository,
) = mock_repos(mocker)

case_service = CaseService(
visit_occurrence_repository=visit_occurrence_repository,
concept_repository=concept_repository,
measurement_repository=measurement_repository,
observation_repository=observation_repository,
person_repository=person_repository,
drug_exposure_repository=drug_exposure_repository,
configuration_repository=configuration_repository,
system_config_repository=system_config_repository,
diagnose_repository=diagnosis_repository,
)
# Test with a BMI value not in the predefined categories
measurement_bmi_unknown = measurement_fixture(
concept_id=40490382,
value_as_number=25,
measurement_id=8,
person_id=1,
visit_id=1,
)

# when
value = case_service.get_value_of_measurement(measurement_bmi_unknown)

# then
assert value == "25"


class TestGetCaseReview:
def test_get_case_review_with_configuration_and_path_config(self, mocker):
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