Merge pull request #49 from dblodgett-usgs/master

function rename and pkgdown v0.5.0 done

.Rbuildignore

@@ -1,4 +1,6 @@
 ^.*\.Rproj$
 ^\.Rproj\.user$
 .travis.yml
-demo.R
+demo.R
+_pkgdown.yml
+docs

DESCRIPTION

@@ -1,16 +1,18 @@
 Package: ncdfgeom
 Type: Package
-Title: Discrete Sampling Geometry NetCDF
-Version: 0.4.0
+Title: NetCDF Geometry and Timeseries
+Version: 0.5.0
 Date: 2017-07-17
 Authors@R: c(person("David", "Blodgett", role = c("aut", "cre"), 
                     email = "[email protected]"),
              person("Luke", "Winslow", role = "ctb"))
 Description: Tools to create discrete sampling geometry and spatial geometry NetCDF files.
+URL: https://github.com/USGS-R/ncdfgeom
+BugReports: https://github.com/USGS-R/ncdfgeom/issues
 Imports:
     ncdf4,
-    sp,
     sf,
+    sp,
   	rgdal,
     methods,
     dplyr
@@ -24,7 +26,7 @@ Suggests:
     knitr,
     rmarkdown,
     pkgdown,
-    leaflet
+    tidyr
 License: CC0
 LazyData: TRUE
 Encoding: UTF-8

NAMESPACE

@@ -1,17 +1,15 @@
 # Generated by roxygen2: do not edit by hand
 
-export(FromNCDFSG)
-export(ToNCDFSG)
-export(addGeomData)
-export(checkNCDF)
-export(getGmFromPrj)
-export(getPrjFromNCDF)
-export(read_instance_data)
+export(get_gridmapping)
+export(get_prj)
+export(read_attribute_data)
+export(read_geometry)
 export(read_timeseries_dsg)
-export(write_instance_data)
+export(write_attribute_data)
+export(write_geometry)
 export(write_point_dsg)
-export(write_ragged_timeseries_dsg)
 export(write_timeseries_dsg)
+export(write_timeseries_ragged_dsg)
 import(ncdf4)
 importFrom(dplyr,left_join)
 importFrom(methods,is)

R/AAA.R → R/0_ncdfgeom.R

@@ -18,10 +18,18 @@ pkg.env <- new.env()
 pkg.env$multi_val <- 0
 pkg.env$hole_val <- 1
 
-pkg.env$instance_dim_name <- "instance"
-
 # Arbitrary dim and variable names assumed in code.
+pkg.env$instance_dim_name <- "instance"
+pkg.env$time_dim_name <- "time"
+pkg.env$time_var_name <- "time"
+pkg.env$lat_coord_var_name <- "lat"
+pkg.env$lon_coord_var_name <- "lon"
+pkg.env$alt_coord_var_name <- "alt"
+pkg.env$str_len_dim <- "name_strlen"
+pkg.env$dsg_timeseries_id <- "instance_name"
 pkg.env$node_dim_name <- "node"
+pkg.env$x_nodes <- "x_nodes"
+pkg.env$y_nodes <- "y_nodes"
 pkg.env$part_dim_name <- "part"
 pkg.env$part_node_count_var_name <- "part_node_count"
 pkg.env$part_type_var_name <- "interior_ring"
@@ -40,6 +48,11 @@ pkg.env$part_node_count_attr_name <- "part_node_count"
 pkg.env$part_type_attr_name <- "interior_ring"
 pkg.env$geometry_container_att_name <- "geometry"
 pkg.env$crs <- "grid_mapping"
+pkg.env$time_var_standard_name <- "time"
+pkg.env$lat_coord_var_standard_name <- "latitude"
+pkg.env$lon_coord_var_standard_name <- "longitude"
+pkg.env$alt_coord_var_standard_name <- "height"
+pkg.env$timeseries_id_cf_role <- "timeseries_id"
 
 check_geomData <- function(geomData) {
 	if (any(c("sf", "sfc") %in% class(geomData))) {