Skip to content

Commit

Permalink
allow step for refinement
Browse files Browse the repository at this point in the history
  • Loading branch information
Daniel-VM committed Sep 5, 2024
1 parent 0b02573 commit a0d2446
Showing 1 changed file with 1 addition and 0 deletions.
1 change: 1 addition & 0 deletions bu_isciii/templates/mag/ANALYSIS/ANALYSIS03_MAG_ALL/lablog
Original file line number Diff line number Diff line change
Expand Up @@ -30,6 +30,7 @@ nextflow run /data/bi/pipelines/nf-core-mag/nf-core-mag-2.5.3/workflow/main.nf \
--input samplesheet.csv \\
--kraken2_db '/data/bi/references/kraken/minikraken_8GB_20200312.tgz' \\
--skip_spadeshybrid true \\
--refine_bins_dastool true \\
--outdir $(date '+%Y%m%d')_mag_all \\
-resume
EOF
Expand Down

0 comments on commit a0d2446

Please sign in to comment.