DeepPhe-Viz

A visualization platform for DeepPhe cancer phenotype data.

Project Overview

DeepPhe-Viz is a web-based application designed to visualize and interact with cancer phenotype data processed by the DeepPhe system. It provides researchers and clinicians with an intuitive interface to explore complex datasets, facilitating better understanding and analysis of cancer phenotypes.

To run the DeepPhe GUI Client: Located in the /client directory:

Prerequisites

• Node.js (v16.x or higher)
• npm (v6.x or higher)
• Modern web browser (Chrome, Firefox, Edge recommended)

Installation

1. Clone the repository:

git clone https://github.com/DeepPhe/DeepPhe-Viz.git
cd DeepPhe-Viz

2. Navigate to the client directory:

cd client

3. Install dependencies:

npm install

4. Start the development server:

npm run start

5. To stop the server, press Ctrl + C in the terminal.

Test

6. Test the server by visiting the following url: http://localhost:3001/deepphe/patient/fake_patient1