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@Dfam-consortium

Dfam Consortium

Resources for the Study of Transposable Element Families

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  1. RepeatMasker RepeatMasker Public

    RepeatMasker is a program that screens DNA sequences for interspersed repeats and low complexity DNA sequences.

    Perl 291 50

  2. RepeatModeler RepeatModeler Public

    De-Novo Repeat Discovery Tool

    Perl 230 25

  3. TETools TETools Public

    Dfam Transposable Element Tools Docker container.

    Perl 101 16

  4. FamDB FamDB Public

    FamDB file format library and utilities

    Python 37 3

  5. AlignmentSummaryViewer AlignmentSummaryViewer Public

    Multiple sequence alignment visualization component

    HTML 7

  6. RepeatMasker_Nextflow RepeatMasker_Nextflow Public

    Nextflow script for running RepeatMasker on a cluster

    Perl 6

Repositories

Showing 10 of 24 repositories
  • RepeatMasker_Nextflow Public

    Nextflow script for running RepeatMasker on a cluster

    Dfam-consortium/RepeatMasker_Nextflow’s past year of commit activity
    Perl 6 0 1 0 Updated Feb 12, 2026
  • Dfam-API Public

    Dfam API server

    Dfam-consortium/Dfam-API’s past year of commit activity
    JavaScript 1 CC0-1.0 0 0 0 Updated Jan 22, 2026
  • TE_Idx Public
    Dfam-consortium/TE_Idx’s past year of commit activity
    Rust 0 MIT 0 0 0 Updated Jan 22, 2026
  • Dfam-Portal Public

    Angular website for Dfam resource

    Dfam-consortium/Dfam-Portal’s past year of commit activity
    TypeScript 1 CC0-1.0 1 0 0 Updated Jan 16, 2026
  • TETools Public

    Dfam Transposable Element Tools Docker container.

    Dfam-consortium/TETools’s past year of commit activity
    Perl 101 CC0-1.0 16 1 0 Updated Dec 17, 2025
  • RepeatMasker Public

    RepeatMasker is a program that screens DNA sequences for interspersed repeats and low complexity DNA sequences.

    Dfam-consortium/RepeatMasker’s past year of commit activity
    Perl 291 50 23 3 Updated Dec 17, 2025
  • RmAlign Public
    Dfam-consortium/RmAlign’s past year of commit activity
    Python 0 0 0 0 Updated Nov 6, 2025
  • FamDB Public

    FamDB file format library and utilities

    Dfam-consortium/FamDB’s past year of commit activity
    Python 37 3 0 0 Updated Aug 27, 2025
  • DfamTEBrowser Public

    Transposable Element Family Genome Browser

    Dfam-consortium/DfamTEBrowser’s past year of commit activity
    Python 0 CC0-1.0 0 1 0 Updated Aug 1, 2025
  • dfam_igv.js Public Forked from igvteam/igv.js

    Embeddable genomic visualization component based on the Integrative Genomics Viewer with Dfam Extensions

    Dfam-consortium/dfam_igv.js’s past year of commit activity
    HTML 0 MIT 242 0 0 Updated Aug 1, 2025
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