CI issue fixing + tests #4
Workflow file for this run
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| name: HTTomo docs iris | |
| on: | |
| workflow_dispatch: | |
| pull_request: | |
| branches: | |
| - main | |
| push: | |
| branches: | |
| - main | |
| jobs: | |
| iris-gpu: | |
| runs-on: iris-gpu-docs | |
| container: | |
| image: nvidia/cuda:11.6.2-devel-ubi8 | |
| env: | |
| NVIDIA_VISIBLE_DEVICES: ${{ env.NVIDIA_VISIBLE_DEVICES }} | |
| defaults: | |
| run: | |
| shell: bash -l {0} | |
| steps: | |
| - name: Checkout repository code | |
| uses: actions/checkout@v4 | |
| - name: Setup Python 3.10 | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: '3.10' | |
| - name: httomo-docs-iris | |
| uses: conda-incubator/setup-miniconda@v2 | |
| with: | |
| auto-update-conda: false | |
| activate-environment: httomo-docs | |
| environment-file: ./docs/source/doc-conda-requirements.yml | |
| - name: Install httomo-dev | |
| run: | | |
| micromamba activate httomo | |
| pip install .[dev] | |
| pip install --upgrade --force-reinstall pillow | |
| micromamba list | |
| - name: Build api docs | |
| run: sphinx-apidoc -feT -t=./docs/source/_templates -o ./docs/source/api ./httomo | |
| - name: Generate yaml templates | |
| run: | | |
| python ./scripts/yaml_templates_generator.py -i ./httomo/methods_database/packages/httomo_modules.yaml -o ./httomo/yaml_templates/httomo | |
| python ./scripts/yaml_templates_generator.py -i ./httomo/methods_database/packages/external/tomopy/tomopy_modules.yaml -o ./httomo/yaml_templates/tomopy | |
| python ./scripts/yaml_unsupported_tomopy_remove.py -t ./httomo/yaml_templates/tomopy -l ./httomo/methods_database/packages/external/tomopy/tomopy.yaml | |
| python ./scripts/yaml_templates_generator.py -i ./httomo/methods_database/packages/external/httomolib/httomolib_modules.yaml -o ./httomo/yaml_templates/httomolib | |
| python ./scripts/yaml_templates_generator.py -i ./httomo/methods_database/packages/external/httomolibgpu/httomolibgpu_modules.yaml -o ./httomo/yaml_templates/httomolibgpu | |
| - name: Generate yml docs | |
| run: python ./docs/source/yaml_doc_generator.py | |
| - name: Build html | |
| run: sphinx-build -a -E -b html ./docs/source/ ./docs/build/ | |
| - name: Publish docs | |
| if: github.ref_type == 'tag' || github.ref_name == 'main' | |
| run: ghp-import -n -p -f ./docs/build | |
| env: | |
| GITHUB_TOKEN: ${{ github.token }} |