v1.0.0

What's Changed

• Update of resource assignments per module by @Ge94 in #3
• Added support for metatranscriptomics and private data by @Ge94 in #4
• Some tweaks on top of the restructure_outputs branch. by @mberacochea in #7
• Feature/restructure outputs by @KateSakharova in #6
• Fix the coverage report, we were using the samtools flags for decont. instead of mapping by @mberacochea in #8
• Refactor the single_end meta thing to be pulled from the ENA metadata. by @mberacochea in #9

New Contributors

• @KateSakharova made their first contribution in #6

Full Changelog: v1.0.0-beta...v1.0.0

First pre-release

This is the first pre-release of the EBI Metagenomics assembly pipeline in nextflow, miassembler. It currently supports short read assembly preceded by read qc with fastp, and pre- and post-assembly host decontamination.