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fix docker image names
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jamesamcl committed Dec 14, 2024
1 parent 1278769 commit 750f07e
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Showing 2 changed files with 4 additions and 4 deletions.
4 changes: 2 additions & 2 deletions dataload/07_create_db/solr/solr_import.slurm.py
Original file line number Diff line number Diff line change
Expand Up @@ -39,7 +39,7 @@ def main():
'--bind ' + os.path.abspath(os.path.join(os.environ['GREBI_DATALOAD_HOME'], '07_create_db/solr/solr_import.dockerpy')) + ':/import.py',
#'--writable-tmpfs',
'--net --network=none',
'docker://ghcr.io/ebispot/grebi_solr_with_python:9.5.0',
'docker://ghcr.io/ebispot/grebi_solr_with_extras:9.5.0',
'python3 /import.py', args.core, args.port, args.mem
])
else:
Expand All @@ -54,7 +54,7 @@ def main():
'-v ' + os.path.abspath(args.solr_config) + ':/config',
'-v ' + os.path.abspath(args.out_path) + ':/var/solr',
'-v ' + os.path.abspath(os.path.join(os.environ['GREBI_DATALOAD_HOME'], '07_create_db/solr/solr_import.dockerpy')) + ':/import.py',
'ghcr.io/ebispot/grebi_solr_with_python:9.5.0',
'ghcr.io/ebispot/grebi_solr_with_extras:9.5.0',
'python3 /import.py', args.core, args.port, args.mem
])

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4 changes: 2 additions & 2 deletions dataload/08_run_queries/run_queries.slurm.py
Original file line number Diff line number Diff line change
Expand Up @@ -39,7 +39,7 @@ def main():
'--writable-tmpfs',
'--network=none',
'--env NEO4J_AUTH=none',
'docker://ghcr.io/ebispot/grebi_neo4j_with_python:latest',
'docker://ghcr.io/ebispot/grebi_neo4j_with_extras:latest',
'python3 /run_queries.py'
])
else:
Expand All @@ -52,7 +52,7 @@ def main():
'-v ' + shlex.quote(neo_logs_path) + ':/logs',
'-v ' + os.path.abspath('./08_run_queries/run_queries.dockerpy') + ':/run_queries.py',
'-e NEO4J_AUTH=none',
'ghcr.io/ebispot/grebi_neo4j_with_python:latest',
'ghcr.io/ebispot/grebi_neo4j_with_extras:latest',
'python3 /run_queries.py'
])

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