add upheno2

EBISPOT · Sep 11, 2024 · 7f27d4e · 7f27d4e
1 parent 29867bd
commit 7f27d4e
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Showing 2 changed files with 6 additions and 6 deletions.
diff --git a/configs/datasource_configs/ols.json b/configs/datasource_configs/ols.json
@@ -6,7 +6,7 @@
             "ingest_files": ["/nfs/production/parkinso/spot/ols4/prod/slurm_pipeline/ontologies.json.gz"],
             "ingest_script": "./target/release/grebi_ingest_ols",
             "ingest_args": [
-                { "name": "--ontologies", "value": "efo,mp,hp,go,ro,iao,uberon,pato,oba,chebi,bspo,iao,obi,bfo,cob,cl,so,eco,pr,ncbitaxon,oio,iao,biolink,mondo,doid,cheminf,dc,dcterms,ncit,edam" },
+                { "name": "--ontologies", "value": "efo,mp,hp,go,ro,iao,uberon,pato,oba,chebi,bspo,iao,obi,bfo,cob,cl,so,eco,pr,ncbitaxon,oio,iao,biolink,mondo,doid,cheminf,dc,dcterms,ncit,edam,upheno" },
                 { "name": "--skip-obsolete", "value": "" }
             ]
         }

diff --git a/configs/subgraph_configs/ebi_full_monarch.json b/configs/subgraph_configs/ebi_full_monarch.json
@@ -4,8 +4,7 @@
     "bytes_per_merged_file": 1073741824,
     "identifier_props": [
         "id",
-        "owl:equivalentClass",
-        "owl:equivalentProperty",
+        "owl:equivalentClass", "owl:equivalentProperty",
         "owl:sameAs",
         "grebi:equivalentTo",
         "ols:iri",
@@ -20,9 +19,10 @@
         "skos:exactMatch",
         "ncit:P368",
         "ncit:C98965",
-	"cheminf:000407",
-	"dcterms:identifier",
-        "oboinowl:hasAlternativeId"
+        "cheminf:000407",
+        "dcterms:identifier",
+        "oboinowl:hasAlternativeId",
+        "semapv:crossSpeciesExactMatch"
     ],
     "type_superclasses": [
         "mondo:0000001",