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EvoXTorch Staging #160

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EvoXTorch Staging #160

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BillHuang2001
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@BillHuang2001 BillHuang2001 commented Jan 7, 2025 •
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Description

Merge the staged changes in evoxtorch-main to main when ready.
This will trigger the CI in the main branch.

Checklist

  • I have formatted my Python code with black.
  • I have good commit messages.
  • If adding new algorithms, problems, operators:
    • Added related test cases.
    • Added docstring to explain important parameters.
    • Added entries in the docs.

BillHuang2001 and others added 30 commits January 9, 2025 01:41
@BillHuang2001
Ruff ignore E501 line length error
505d4e5
@BillHuang2001
Format code
3c7249e
@BillHuang2001
Add __all__ to all module level imports
4d42b0f
@BillHuang2001
Delete dead variable
08c29a0
@BillHuang2001
Improve code style
2c354ef
@sses7757
Fix some test fail due to incorrect usage of JIT; change Brax import …
5e7ad66 
…to prevent unnecessary import JAX
@BillHuang2001
Update test instruction
7cdefc9
@BillHuang2001
Add example of running a single test case
1586504
@BillHuang2001
Relax the accuracy requirement to pass the test
bad0c4e
@Zhenyu2Liang
change shape to size
b09eb4e
@sses7757
Separate run script and run trace tests in algorithm tests
551bba5
@sses7757
Merge pull request #157 from EMI-Group/evoxtorch-dev-bh
11acb48 
EvoXTorch project structure changes
@sses7757
Merge remote-tracking branch 'evox/evoxtorch-main' into evoxtorch-dev…
9b5c908 
…-lxy
@BillHuang2001
Add optional test and docs dependencies
462f67b
@BillHuang2001
Update readthedocs build config
4c2d535
@BillHuang2001
Mock brax and torchvision during doc build
28acb31
@BillHuang2001
Add polib to docs build dependency
3b99eec
@BillHuang2001
Fix dlpack usage in brax
5eb8060
@BillHuang2001
Remove cuda specific statement in the test case
afe586d
@sses7757
Change problem directory
61bbf87
@sses7757
Change HPOProblemWrapper unused API (extract_params) to get_init_params
4038422
@starquakee
fix de.py selection bug and add ode.py
4837273
@starquakee
black de.py and ode.py
e85bc60
@XU-Boqing
Simplify katsuura_func and schaffer_F7_func.
7d96c1b
@XU-Boqing
Simplify katsuura_func and schaffer_F7_func.
72e8a7c
@XU-Boqing
Simplify katsuura_func and schaffer_F7_func.
00b932c
@sses7757
Adding checking with original codes
a66785a
@Zhenyu2Liang
update structure of evox
d80ca43
@Zhenyu2Liang
Merge branch 'evoxtorch-main' of https://github.com/EMI-Group/evox in…
5c9075e 
…to evoxtorch-dev-lzy

# Conflicts:
#	src/evox/algorithms/__init__.py
#	src/evox/algorithms/de_variants/__init__.py
#	src/evox/algorithms/es_variants/__init__.py
#	src/evox/problems/neuroevolution/__init__.py
#	src/evox/utils/__init__.py
#	src/evox/utils/jit_fix_operator.py
@sses7757 @BillHuang2001
Update jit_class to include doc and dir
11897f1
Nam-dada and others added 22 commits January 13, 2025 10:11
@Nam-dada
Add cite.
f4eafdd
@Nam-dada
Update the output.
8639f8c
@sses7757
Merge pull request #193 from Nam-dada/evoxtorch-dev-ynw
4957c6d 
Add link for examples
@sses7757
Merge branch 'evoxtorch-main' into evoxtorch-main
a3d2134
@sses7757
Update __init__.py for de_variants
79dea2c
@sses7757
Remove unused vmap in TracingWhile
f1cdcd1
@JiangTao97
Update the installation guide
34427c2
@sses7757
Merge pull request #191 from JiangTao97/evoxtorch-dev-jt
3de8ba1 
Add EvoX installation guide
@BillHuang2001
Improve get_vmap_model_state_forward to correctly return both normal …
186db89 
…and vmap result
@BillHuang2001
Convert to the new get_vmap_model_state_forward
fb4904f
@BillHuang2001
Enable brax visualization
c0719a7
@BillHuang2001
Test brax visualize
9ce0390
@BillHuang2001
Fix load static files
cc21233
@BillHuang2001
Remove dead code
40231bb
@BillHuang2001
Fix __all__ in evox
0f0d364
@BillHuang2001
Fix typo in cross reference
60ab942
@BillHuang2001
Update po file
2e9fd0b
@sses7757
Add docstring for DE and ES and fix vmap bugs for them
e63f5eb
@sses7757
Ruff format the code
28ea682
@sses7757
Merge pull request #187 from LYinMX/evoxtorch-main
459b93f 
Add some ES and DE
@sses7757
Merge pull request #194 from EMI-Group/evoxtorch-dev-bh
25a7c98 
Enable brax visualize
@BillHuang2001
Update exv's document
eea21e7 
fix typo
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