Bump version number

CITATION.cff

@@ -1,7 +1,7 @@
 cff-version: 1.1.0
 message: "If you use this software, please cite it as below."
 title: 'Eden-Kramer-Lab/spectral_connectivity'
-doi: 10.5281/zenodo.4088934
+doi: 10.5281/zenodo.1011052
 authors:
   - family-names: Eric
     given-names: Denovellis
@@ -19,7 +19,7 @@ authors:
     orcid: https://orcid.org/0000-0003-1978-9622
 
 title: Eden-Kramer-Lab/spectral_connectivity
-version: v1.0.3
-date-released: 2022-09-14
+version: v1.1.0
+date-released: 2022-12-08
 repository-code: https://github.com/Eden-Kramer-Lab/spectral_connectivity
 license: GPL-3.0

docs/conf.py

@@ -3,6 +3,8 @@
 
 import os
 import shutil
+import re
+import spectral_connectivity
 
 
 # -- Project information -----------------------------------------------------
@@ -13,10 +15,14 @@
 copyright = "2022, Eric L. Denovellis"
 author = "Eric L. Denovellis"
 
-# The short X.Y version.
-version = "1..0"
+# The full version, including alpha/beta/rc tags
+
+# The short X.Y version (including .devXXXX, rcX, b1 suffixes if present)
+version = re.sub(r"(\d+\.\d+)\.\d+(.*)", r"\1\2", spectral_connectivity.__version__)
+version = re.sub(r"(\.dev\d+).*?$", r"\1", version)
 # The full version, including alpha/beta/rc tags.
-release = "1.0.4"
+release = spectral_connectivity.__version__
+print("%s %s" % (version, release))
 
 # -- General configuration ------------------------------------------------
 

setup.py

@@ -1,5 +1,8 @@
 #!/usr/bin/env python3
 
+import codecs
+import os.path
+
 from setuptools import find_packages, setup
 
 INSTALL_REQUIRES = [
@@ -10,17 +13,33 @@
 ]
 TESTS_REQUIRE = ["pytest >= 2.7.1", "nitime"]
 
+
+def read(rel_path):
+    here = os.path.abspath(os.path.dirname(__file__))
+    with codecs.open(os.path.join(here, rel_path), "r") as fp:
+        return fp.read()
+
+
+def get_version(rel_path):
+    for line in read(rel_path).splitlines():
+        if line.startswith("__version__"):
+            delim = '"' if '"' in line else "'"
+            return line.split(delim)[1]
+    else:
+        raise RuntimeError("Unable to find version string.")
+
+
 setup(
     name="spectral_connectivity",
-    version="1.0.4",
+    version=get_version("spectral_connectivity/__init__.py"),
     license="GPL-3.0",
     description=(
         "Frequency domain functional and directed"
         "connectivity analysis tools for electrophysiological"
         "data"
     ),
     author="Eric Denovellis",
-    author_email="edeno@bu.edu",
+    author_email="eric.denovellis@ucsf.edu",
     url="https://github.com/Eden-Kramer-Lab/spectral_connectivity",
     # long_description=open("README.md").read(),
     long_description_content_type="text/x-rst",

spectral_connectivity/__init__.py

@@ -2,3 +2,5 @@
 from spectral_connectivity.connectivity import Connectivity
 from spectral_connectivity.transforms import Multitaper
 from spectral_connectivity.wrapper import multitaper_connectivity
+
+__version__ = "1.1.0"