Allow https download and GITHUB_TOKEN in VEP Install #1805
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olaaustine
reviewed
Jan 7, 2025
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Hi @olaaustine , thanks for the good suggestions, have updated them all. Also, updated the usage text in public plugins doc - https://github.com/Ensembl/public-plugins/pull/844/files |
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Pushed to main and release/114 |
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ENSVAR-6431
--USE_HTTPS_PROTOwhich would allow using https protocol to download cache and FASTA file instead of FTP. Useful in network where FTP port is blocked.--GITHUBTOKENor--GITHUB_TOKENwhich would allow providing GITHUB token to query GitHub API using curl and allow increase in rate limit.Public doc update - Ensembl/public-plugins#844