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Genetic Interaction Step #36

Merged
merged 29 commits into from
Jul 17, 2024
Merged

Genetic Interaction Step #36

merged 29 commits into from
Jul 17, 2024

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cansavvy
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@cansavvy cansavvy commented Jun 21, 2024

Description

This closes #6 !

This is how this can be run:

gimap_dataset <- gimap_dataset %>%
  gimap_filter() %>%
  gimap_annotate() %>%
  gimap_normalize(
    timepoints = "day",
    replicates = "rep") %>%
  calc_crispr() %>%
  calc_gi()

@cansavvy cansavvy marked this pull request as draft June 21, 2024 13:53
@cansavvy cansavvy marked this pull request as ready for review July 16, 2024 20:08
@cansavvy
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Everything here is working (except windows see #48 ) so in the spirit of working on more of this in smaller pieces I'm going to merge and start tracking bugs! and polishing more

@cansavvy cansavvy merged commit 37c718e into main Jul 17, 2024
5 of 7 checks passed
@cansavvy cansavvy deleted the cansavvy/gi_calc branch July 17, 2024 19:41
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Functionalize Step 4: Calculate GI scores
1 participant