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24 Open 80 Closed
24 Open 80 Closed
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Issues list

tangermeme backend
#197 opened May 31, 2024 by jmschrei
Is there a model fine-tuning function?
#195 opened Dec 10, 2023 by HanwenZhu98
Columns and DataType Not Explicitly Set on line 25 of download_data.py
#194 opened Nov 9, 2023 by CodeSmileBot
version update
#193 opened Jul 6, 2023 by guandailu
Model source code file should be copied to the output directory enhancement
#190 opened Dec 2, 2022 by evancofer
Loggers never close
#189 opened Nov 14, 2022 by rfriedman22
model is suitable for classification？
#182 opened Jan 12, 2022 by Jasonxu0109
Support NN models with multiple inputs
#161 opened Feb 27, 2021 by sashuIya
1
2
Support for non-classifier models in IntervalSampler and RandomSampler
#148 opened Jun 26, 2020 by laueste
1
Train and evaluate without evalute_model initialization in config does not work bug
#146 opened Jun 3, 2020 by kathyxchen
4
MPRA tutorial - testing r2 with CPU not agreeing with GPUs.
#145 opened May 25, 2020 by ilibarra
1
Prediction functions crash when filtered input is empty bug
#136 opened Jan 28, 2020 by evancofer
add parameter to append existing columns in VCF to output files in variant effect prediction enhancement
#129 opened Dec 3, 2019 by kathyxchen
@kathyxchen
Fasta file in quickstart_training config file conflicts with zenodo bug
#109 opened Aug 17, 2019 by evancofer
Add a function to export Selene-trained models to Kipoi
#62 opened Dec 13, 2018 by kathyxchen
Support models that predict continuous-valued outputs enhancement
#59 opened Dec 7, 2018 by kathyxchen
Add support for circular chromosomes enhancement
#51 opened Sep 10, 2018 by evancofer
GenomicFeatures should be able to label multiple adjacent "bins" in a sequence
#46 opened Aug 7, 2018 by kathyxchen
GTF file parser for non-DNA sequence-based training
#45 opened Aug 7, 2018 by kathyxchen
ISM "interpret" based on score (diff or logit)
#30 opened Apr 27, 2018 by kathyxchen
Adding an RNA sequence class? question
#29 opened Apr 25, 2018 by kathyxchen
1
Check for a strand column in the tabix-indexed file
#26 opened Apr 19, 2018 by kathyxchen
speed up in silico mutagenesis enhancement
#23 opened Apr 13, 2018 by kathyxchen
1
Create a sampler that uses queries from SQL/pandas? question
#19 opened Apr 13, 2018 by kathyxchen
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