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Correct synonym labels #86

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Merged
edeutsch merged 2 commits into from
Nov 17, 2025
Merged

Correct synonym labels #86

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015cf04
Correct synonym labels
edeutsch Nov 17, 2025
c4ec1d5
Update version
edeutsch Nov 17, 2025
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14 changes: 7 additions & 7 deletions PSI-MOD.obo
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Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
format-version: 1.2
ontology: mod
date: 04:11:2025 12:12
date: 17:11:2025 12:12
saved-by: Eric Deutsch
subsetdef: PSI-MOD-slim "subset of protein modifications"
synonymtypedef: DeltaMass-label "Label from MS DeltaMass" EXACT
Expand All @@ -17,8 +17,8 @@ synonymtypedef: Unimod-description "Description (full_name) from Unimod" RELATED
synonymtypedef: Unimod-interim "Interim label from Unimod" RELATED
synonymtypedef: UniProt-feature "Protein feature description from UniProtKB" EXACT
default-namespace: PSI-MOD
data-version: 1.032.1
remark: PSI-MOD version: 1.032.1
data-version: 1.032.2
remark: PSI-MOD version: 1.032.2
remark: RESID release: 75.00
remark: ISO-8601 date: 2022-06-13 12:12Z
remark: Annotation note 01 - "[PSI-MOD:ref]" has been replaced by PubMed:18688235.
Expand Down Expand Up @@ -41243,10 +41243,10 @@ is_a: MOD:02099 ! residue modified by radical hydroxylation
id: MOD:02104
name: 4-hydroxy-L-phenylalanine
def: "A protein modification that effectively substitutes a hydroxy group at position 4 of L-phenylalanine" [PubMed:7408053]
synonym: "L-tyrosine" EXACT PSI-MOD-name []
synonym: "L-Tyrosine" EXACT PSI-MOD-name []
synonym: "(2S)-2-amino-3-(4-hydroxyphenyl)propanoic acid" EXACT PSI-MOD-name []
synonym: "Phe->Tyr" EXACT PSI-MOD-name []
synonym: "L-tyrosine" EXACT PSI-MOD-alternate []
synonym: "L-Tyrosine" EXACT PSI-MOD-alternate []
synonym: "(2S)-2-amino-3-(4-hydroxyphenyl)propanoic acid" EXACT PSI-MOD-alternate []
synonym: "Phe->Tyr" EXACT PSI-MOD-alternate []
subset: PSI-MOD-slim
xref: DiffFormula: "O 1"
xref: Origin: "F"
Expand Down