Search results

Trouble while working with .csi indexes

Status: Open.

#28 In HerwigLab/IsoTools2;

· lorenzopanca5 opened on Nov 28, 2025

Lookup of Gene object in Transcriptome should warn if identifier is not unique

Status: Open.

#27 In HerwigLab/IsoTools2;

· kbseah opened on Nov 18, 2025

<code>add_orf_prediction</code> fails with KeyError when Fasta file has lowercase characters

Status: Open.

#26 In HerwigLab/IsoTools2;

· kbseah opened on Oct 22, 2025

IsoTools2 integration with Iso-Seq data

Status: Open.

#25 In HerwigLab/IsoTools2;

· RoyPollak opened on Oct 17, 2025

<code>add_domains_to_table</code> silently fails to add some overlapping domains with options <code>overlap=True</code> and <code>source="hmmer"</code>

Status: Open.

#23 In HerwigLab/IsoTools2;

· kbseah opened on Aug 6, 2025

Broken download links for example dataset in documentation

Status: Open.

#21 In HerwigLab/IsoTools2;

· kbseah opened on Aug 5, 2025

Deprecated alias <code>np.bool</code>

Status: Open.

#20 In HerwigLab/IsoTools2;

· kbseah opened on Aug 4, 2025

Using the demonstration_data, gives error: ValueError: The truth value of an array with more than one element is ambiguous. Use a.any() or a.all()

Status: Open.

#19 In HerwigLab/IsoTools2;

· sbridgett opened on Jun 6, 2025