modified examples

.gitignore

@@ -130,6 +130,7 @@ examples/*/*/*/output/*
 examples/*/*/*/results/
 examples/*/*/*/figures/
 examples/*/*/test_*
+examples/*/*/jordan_*
 EVENTS.txt
 examples/*/*/deterministic/
 examples/*/*/*/deterministic/

examples/plot_scale/freiburg_altheim_kupferzell/README.md

@@ -1,12 +1,17 @@
 # Modelling virtual tracer transport with Roger using climate projections and land cover scenarios
 
-All results have been generated with Roger version 3.0.
-
-- `make_figures_and_tables.py`: Produces figures and tables from data of the modelling experiment
-- `write_moab_jobs.py`: Generates job scripts for computation on BinAC cluster using the MOAB workload manager
+- `pre_processing.py`: Prepare the input data and plot delta changes of climate signal
+- `write_moab_jobs.py`: Generate job scripts for computation on BinAC cluster using the MOAB workload manager
+- `write_slurm_jobs.py`: Generate job scripts for computation on BwUniCluster 2.0 cluster using the SLURM workload manager
+- `submit_*.sh`: Script to submit batch jobs
+- `plot_time_series.py`: Plot time series
+- `calculate_delta_changes.py`: Calculate delta changes for near future (2040 - 2060) and far future (2080 - 2100)
+- `calculate_change_attribution.py`: Quantify change attribution of soil physical properties and climate signal using linear models
 
 ## climate_projections
-Contains climate projections from regional climate models
+Contains climate projections from regional climate models. We use the data of the following climate projections:
+- CCCma-CanESM2 CCLM4-8-17 ("dry" and "warm")
+- MPI-M-MPI-ESM-LR RCA4 ("wet" and "cool")
 
 ## dwd
 Contains daily minimum and maximum air temperature measured at DWD stations
@@ -19,9 +24,79 @@ implementation of the model setup and the corresponding job-script(s) for comput
 on a cluster, and Python-scripts for post-processing. If the file name of the
 job scripts contains `_gpu` computations run on GPU.
 
-## Hydrologic simulations
-### svat
+## input/land_cover_scenario
+- grass
+- Corn
+- Corn and catch crop
+- Crop rotation (winter barley, catch crop, sugar beet, winter wheat)
 
+## Hydrological simulations
+### svat
+- `svat.py`: SVAT-model setup
+- `svat_crop.py`: SVAT-CROP-model setup
+- `svat_*.sh`: Job scripts to run the SVAT-model
+- `svat_crop_*.sh`: Job scripts to run the SVAT-CROP-model
+- `merge_output.py`: Merges model output into a single file
 
 ## Transport simulations
 ### svat_transport
+- `svat.py`: SVAT-model setup
+- `svat_crop.py`: SVAT-CROP-model setup
+- `svat_*.sh`: Job scripts to run the SVAT-model
+- `svat_crop_*.sh`: Job scripts to run the SVAT-CROP-model
+- `merge_output.py`: Merges model output into a single file
+
+## Workflow
+
+1. Make the input data ready for the simulations:
+```
+python pre_processing.py
+```
+
+2. Here, I provide an example shell scripts can be generated. These scripts can be submitted to a computing cluster:
+```
+python write_slurm_jobs.py
+```
+
+3. Run the model to simulate hydrological fluxes and storages by submitting the model script to a computing cluster:
+```
+./submit_svat_grass_jobs_slurm.sh
+./submit_svat_corn_jobs_slurm.sh
+./submit_svat_corn_catch_crop_jobs_slurm.sh
+./submit_svat_crop_rotation_jobs_slurm.sh
+```
+
+4. Merge the model output into single files:
+```
+cd svat
+python merge_output.py
+```
+
+5. Run the model to simulate virtual tracer concentrations and travel times by submitting the model script to a computing cluster:
+```
+./submit_svat_grass_transport_jobs_slurm.sh
+./submit_svat_corn_transport_jobs_slurm.sh
+./submit_svat_corn_catch_crop_transport_jobs_slurm.sh
+./submit_svat_crop_rotation_transport_jobs_slurm.sh
+```
+
+6. Merge the model output into single files
+```
+cd svat_transport
+python merge_output.py
+```
+
+7. Plot the time series:
+```
+python plot_time_series.py
+```
+
+8. Calculate the delta changes of the simulated variables:
+```
+python calculate_delta_changes.py
+```
+
+9. Quantify the change attribution:
+```
+python calculate_change_attribution.py
+```