Don't merge Feature/v4.0.4 to master

ARCH/ANEMONE/XIOS/arch-anemone-ifort-impi.env

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+module purge
+module load NEMO/prg-env

ARCH/ANEMONE/XIOS/arch-anemone-ifort-impi.fcm

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+%CCOMPILER           mpiicc
+%FCOMPILER           mpiifort
+%LINKER              mpiifort -nofor-main
+
+%BASE_CFLAGS    -fPIC -std=c++98
+%PROD_CFLAGS    -O3 -D BOOST_DISABLE_ASSERTS
+%DEV_CFLAGS     -g
+%DEBUG_CFLAGS   -DBZ_DEBUG -g -fno-inline
+
+%BASE_FFLAGS    -fPIC -D__NONE__ -132
+%PROD_FFLAGS    -O3
+%DEV_FFLAGS     -g -O2 -traceback
+%DEBUG_FFLAGS   -g -traceback
+
+%BASE_INC       -D__NONE__
+%BASE_LD        -lstdc++
+
+%CPP            mpiicc -EP
+%FPP            cpp -P
+%MAKE           gmake

ARCH/ANEMONE/XIOS/arch-anemone-ifort-impi.path

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+NETCDF_INCDIR="-I$EBROOTNETCDF/include"
+NETCDF_LIBDIR="-L$EBROOTNETCDF/lib"
+NETCDF_LIB="-lnetcdff -lnetcdf"
+MPI_INCDIR=""
+MPI_LIBDIR=""
+MPI_LIB=""
+HDF5_INCDIR=""
+HDF5_LIBDIR=""
+HDF5_LIB=""

ARCH/ANEMONE/arch-anemone-ifort-impi.fcm

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+# generic ifort compiler options for linux
+#
+# NCDF_HOME   root directory containing lib and include subdirectories for netcdf4
+# HDF5_HOME   root directory containing lib and include subdirectories for HDF5
+# XIOS_HOME   root directory containing lib for XIOS
+# OASIS_HOME  root directory containing lib for OASIS
+#
+# NCDF_INC    netcdf4 include file
+# NCDF_LIB    netcdf4 library
+# XIOS_INC    xios include file    (taken into accound only if key_xios is activated)
+# XIOS_LIB    xios library         (taken into accound only if key_xios is activated)
+# OASIS_INC   oasis include file   (taken into accound only if key_oasis3 is activated)
+# OASIS_LIB   oasis library        (taken into accound only if key_oasis3 is activated)
+#
+# FC          Fortran compiler command
+# FCFLAGS     Fortran compiler flags
+# FFLAGS      Fortran 77 compiler flags
+# LD          linker
+# LDFLAGS     linker flags, e.g. -L<lib dir> if you have libraries
+# FPPFLAGS    pre-processing flags
+# AR          assembler
+# ARFLAGS     assembler flags
+# MK          make
+# USER_INC    complete list of include files
+# USER_LIB    complete list of libraries to pass to the linker
+# CC          C compiler used to compile conv for AGRIF
+# CFLAGS      compiler flags used with CC
+#
+# Note that:
+#  - unix variables "$..." are accpeted and will be evaluated before calling fcm.
+#  - fcm variables are starting with a % (and not a $)
+#
+%NCDF_HOME           $EBROOTNETCDF
+%HDF5_HOME           $EBROOTHDF5
+%XIOS_HOME           XXX_XIOS_XXX
+
+%NCDF_INC            -I%NCDF_HOME/include
+%NCDF_LIB            -L%NCDF_HOME/lib -lnetcdff -lnetcdf -L%HDF5_HOME/lib -lhdf5_hl -lhdf5 -lhdf5
+%XIOS_INC            -I%XIOS_HOME/inc
+%XIOS_LIB            -L%XIOS_HOME/lib -lxios -lstdc++
+
+%CPP                 cpp
+%FC                  mpiifort -c -fpp -fpp-name:/opt/software/rocky9/eb/software/GCCcore/12.3.0/bin/cpp -Wp,-P,-traditional
+%FCFLAGS             -i4 -r8 -O3 -fp-model precise -fno-alias
+%FFLAGS              %FCFLAGS
+%LD                  mpiifort
+%LDFLAGS
+%FPPFLAGS            -P -traditional
+%AR                  ar
+%ARFLAGS             rs
+%MK                  gmake
+%USER_INC            %XIOS_INC %NCDF_INC
+%USER_LIB            %XIOS_LIB %NCDF_LIB
+
+%CC                  cc -Wl,--allow-multiple-definition
+%CFLAGS              -O0

ARCH/SINGULARITY/nemo/arch-singularity.fcm

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+# compiler options for Archer CRAY XC-30 (using crayftn compiler)
+# 
+# NCDF_HOME   root directory containing lib and include subdirectories for netcdf4
+# HDF5_HOME   root directory containing lib and include subdirectories for HDF5
+# XIOS_HOME   root directory containing lib for XIOS
+# OASIS_HOME  root directory containing lib for OASIS
+#
+# NCDF_INC    netcdf4 include file
+# NCDF_LIB    netcdf4 library
+# XIOS_INC    xios include file    (taken into accound only if key_iomput is activated)
+# XIOS_LIB    xios library         (taken into accound only if key_iomput is activated)
+# OASIS_INC   oasis include file   (taken into accound only if key_oasis3 is activated)
+# OASIS_LIB   oasis library        (taken into accound only if key_oasis3 is activated)
+#
+# FC          Fortran compiler command
+# FCFLAGS     Fortran compiler flags
+# FFLAGS      Fortran 77 compiler flags
+# LD          linker
+# LDFLAGS     linker flags, e.g. -L<lib dir> if you have libraries
+# FPPFLAGS    pre-processing flags
+# AR          assembler
+# ARFLAGS     assembler flags
+# MK          make
+# USER_INC    complete list of include files
+# USER_LIB    complete list of libraries to pass to the linker
+# CC          C compiler used to compile conv for AGRIF
+# CFLAGS      compiler flags used with CC
+#
+# Note that:
+#  - unix variables "$..." are accpeted and will be evaluated before calling fcm.
+#  - fcm variables are starting with a % (and not a $)
+#
+%NCDF_HOME           /opt/netcdf/install
+%HDF5_HOME           /opt/hdf5/install
+%XIOS_HOME           XXX_XIOS_DIR_XXX
+
+%NCDF_INC            -I%NCDF_HOME/include -I%HDF5_HOME/include
+%NCDF_LIB            -L%HDF5_HOME/lib -L%NCDF_HOME/lib -lnetcdff -lnetcdf -lhdf5_hl -lhdf5 -lcurl -lz
+%XIOS_INC            -I%XIOS_HOME/inc
+%XIOS_LIB            -L%XIOS_HOME/lib -lxios -lstdc++ -L/usr/lib/gcc/x86_64-linux-gnu/5
+
+%CPP                 cpp -Dkey_nosignedzero -P -traditional
+%FC                  mpif90
+%FCFLAGS             -fdefault-double-8 -fdefault-real-8 -O1 -funroll-all-loops -fcray-pointer -ffree-line-length-none -w -fallow-argument-mismatch
+%FFLAGS              -fdefault-double-8 -fdefault-real-8 -O1 -funroll-all-loops -fcray-pointer -ffree-line-length-none -w -fallow-argument-mismatch
+%LD                  /usr/bin/mpif90
+%FPPFLAGS            -P -traditional
+%LDFLAGS
+%AR                  ar
+%ARFLAGS             -r
+%MK                  gmake
+%USER_INC            %XIOS_INC %NCDF_INC
+%USER_LIB            %XIOS_LIB %NCDF_LIB
+
+%CC                  mpicc
+%CFLAGS              -O0

ARCH/SINGULARITY/xios/arch-singularity.env

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+export HDF5_INC_DIR=/opt/hdf5/install/include
+export HDF5_LIB_DIR=/opt/hdf5/install/lib
+
+export NETCDF_INC_DIR=/opt/netcdf/install/include
+export NETCDF_LIB_DIR=/opt/netcdf/install/lib
+
+export BOOST_INC_DIR=$HOME/boost
+export BOOST_LIB_DIR=$HOME/boost

ARCH/SINGULARITY/xios/arch-singularity.fcm

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+%CCOMPILER           mpicc
+%FCOMPILER           mpif90
+%LINKER              mpif90
+
+%BASE_CFLAGS    -w -lcurl
+%PROD_CFLAGS    -O2 -D BOOST_DISABLE_ASSERTS -std=c++98
+%DEV_CFLAGS     -g -O2
+%DEBUG_CFLAGS   -g
+
+%BASE_FFLAGS    -D__NONE__
+%PROD_FFLAGS    -O2 
+%DEV_FFLAGS     -g -O2
+%DEBUG_FFLAGS   -g
+
+%BASE_INC       -D__NONE__
+%BASE_LD        -lcurl -lstdc++
+
+%CPP            cpp
+%FPP            cpp -P
+%MAKE           gmake

ARCH/SINGULARITY/xios/arch-singularity.path

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+NETCDF_INCDIR="-I $NETCDF_INC_DIR"
+NETCDF_LIBDIR="-L $NETCDF_LIB_DIR"
+NETCDF_LIB="-lnetcdff -lnetcdf"
+
+MPI_INCDIR=""
+MPI_LIBDIR=""
+MPI_LIB="-lcurl"
+
+HDF5_INCDIR="-I $HDF5_INC_DIR"
+HDF5_LIBDIR="-L $HDF5_LIB_DIR"
+HDF5_LIB="-lhdf5_hl -lhdf5 -lhdf5 -lz"
+
+BOOST_INCDIR="-I $BOOST_INC_DIR"
+BOOST_LIBDIR="-L $BOOST_LIB_DIR"
+BOOST_LIB=""