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Important changes log
🚀 Here's a log of important changes in bombcell:
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🤝 2023/08/29: Optional compatibility with phy. If
param.saveAsTSV
is true, bombcell saves a tsv file per quality metric in theparam.ephysKilosortPath
path. This needs to be the same path as where all your kilosort output paths are saved. -
🪄 2023/08/23: Move
makepretty
function to a separate repo, so it can be easily used across different projects. Users now need to downloadhttps://github.com/Julie-Fabre/prettify_matlab
and add it to their matlab path. -
🔖 2023/07/21: Bombcell version 1 released! 10.5281/zenodo.8172821
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🥅 2023/07/06: Updated SNR calculation. Previously was using largest peak rather largest absolute value - thanks @LaurenzMuessig!
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🧹 2023/06/23: Added un-whitening step to templates - thanks @petersaj!
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✨ 2023/05/30: New bombcell quality metric parameter
param.extractRaw
to extract or not raw waveforms. This is currently one of bombcell's most time consuming steps. Note that if this option is disabled, you will not compute each units' rawAmplitude or each units' signal-to-noise ratio. -
🐛 2023/05/20: Updated the scaling factor for open-ephys recorded data
💣 Any issues? To get support, create a github issue, create a pull request or write a message on the the Neuropixels slack workgroup.