Open Source Affordable 2 Photon microscope

The codes, software, models, protocols, and etc. for building and using MINI2P to do the freely-moving recording and analysis. More details can be found in the original paper "Large-scale two-photo…

UCLA Multiphoton Miniature Microscope

Code and Data for mPFC Border Representations

Quality control for patch-seq data using marker genes

QC and cell type assignment for patch-seq transcriptomics data

A benchmark for 3D biomolecular structure prediction models

HyperMPNN ‒ A general strategy to design thermostable proteins learned from hyperthermophiles

A trainable PyTorch reproduction of AlphaFold 3.

Genome annotation with AUGUSTUS

Official repository for the Boltz-1 biomolecular interaction model

Code for the ProteinMPNN paper

Chai-1, SOTA model for biomolecular structure prediction

Chai-1, SOTA model for biomolecular structure prediction

Implementation of DiffDock: Diffusion Steps, Twists, and Turns for Molecular Docking

Set up a modern web app by running one command.

DrugHIVE: Structure-based drug design with a deep hierarchical generative model

Multi-locus Sequence Type Identificatino from Multiplexed Amplicon Deep Sequencing

ColabFold on your local PC

PLMSearch enables accurate and fast homologous protein search with only sequences as input

🧬 Toolkit for generating various numerical features of protein sequences

pLDDT Calculator for AlphaFold3 Webserver

AlphaLink: Integrating crosslinking MS data into OpenFold