Claude/add scientific skills plugin 011 c ug6mgw vqq kypv1p qss tx

.claude-desktop-mcp-complete-with-reasoner.json

@@ -0,0 +1,51 @@
+{
+  "mcpServers": {
+    "sequential-thinking": {
+      "command": "docker",
+      "args": [
+        "run",
+        "--rm",
+        "-i",
+        "mcp/sequentialthinking"
+      ]
+    },
+    "perplexity-ask": {
+      "command": "docker",
+      "args": [
+        "run",
+        "-i",
+        "--rm",
+        "-e",
+        "PERPLEXITY_API_KEY",
+        "mcp/perplexity-ask"
+      ],
+      "env": {
+        "PERPLEXITY_API_KEY": "YOUR_PERPLEXITY_API_KEY_HERE"
+      }
+    },
+    "brave-search": {
+      "command": "npx",
+      "args": [
+        "-y",
+        "@modelcontextprotocol/server-brave-search"
+      ],
+      "env": {
+        "BRAVE_API_KEY": "YOUR_BRAVE_API_KEY_HERE"
+      }
+    },
+    "mcp-reasoner": {
+      "command": "node",
+      "args": [
+        "/PATH/TO/YOUR/mcp-reasoner/dist/index.js"
+      ]
+    },
+    "claude-skills-scientific": {
+      "command": "uvx",
+      "args": [
+        "claude-skills-mcp",
+        "--config",
+        "/home/user/claude-scientific-skills/mcp-config.json"
+      ]
+    }
+  }
+}

.claude-desktop-mcp-merged.json

@@ -0,0 +1,45 @@
+{
+  "mcpServers": {
+    "sequential-thinking": {
+      "command": "docker",
+      "args": [
+        "run",
+        "--rm",
+        "-i",
+        "mcp/sequentialthinking"
+      ]
+    },
+    "perplexity-ask": {
+      "command": "docker",
+      "args": [
+        "run",
+        "-i",
+        "--rm",
+        "-e",
+        "PERPLEXITY_API_KEY",
+        "mcp/perplexity-ask"
+      ],
+      "env": {
+        "PERPLEXITY_API_KEY": "YOUR_PERPLEXITY_API_KEY_HERE"
+      }
+    },
+    "brave-search": {
+      "command": "npx",
+      "args": [
+        "-y",
+        "@modelcontextprotocol/server-brave-search"
+      ],
+      "env": {
+        "BRAVE_API_KEY": "YOUR_BRAVE_API_KEY_HERE"
+      }
+    },
+    "claude-skills-scientific": {
+      "command": "uvx",
+      "args": [
+        "claude-skills-mcp",
+        "--config",
+        "/home/user/claude-scientific-skills/mcp-config.json"
+      ]
+    }
+  }
+}

.claude-desktop-mcp-without-docker.json

@@ -0,0 +1,22 @@
+{
+  "mcpServers": {
+    "brave-search": {
+      "command": "npx",
+      "args": [
+        "-y",
+        "@modelcontextprotocol/server-brave-search"
+      ],
+      "env": {
+        "BRAVE_API_KEY": "YOUR_BRAVE_API_KEY_HERE"
+      }
+    },
+    "claude-skills-scientific": {
+      "command": "uvx",
+      "args": [
+        "claude-skills-mcp",
+        "--config",
+        "/home/user/claude-scientific-skills/mcp-config.json"
+      ]
+    }
+  }
+}

.claude-desktop-mcp.json

@@ -0,0 +1,12 @@
+{
+  "mcpServers": {
+    "claude-skills-scientific": {
+      "command": "uvx",
+      "args": [
+        "claude-skills-mcp",
+        "--config",
+        "/home/user/claude-scientific-skills/mcp-config.json"
+      ]
+    }
+  }
+}

.cursor-mcp.json

@@ -0,0 +1,13 @@
+{
+  "mcpServers": {
+    "claude-skills-scientific": {
+      "command": "uvx",
+      "args": [
+        "claude-skills-mcp",
+        "--config",
+        "/home/user/claude-scientific-skills/mcp-config.json"
+      ],
+      "description": "Claude Scientific Skills MCP Server - Access 83+ scientific packages, databases, and methodologies"
+    }
+  }
+}

.gitignore

@@ -10,4 +10,12 @@ uv.lock
 .python-version
 main.py
 
-__pycache__/
+__pycache__/
+# Local MCP config with API keys (do not commit)
+restore-mcp-config.sh
+
+# Script with API keys (do not commit)
+add-mcp-reasoner.sh
+
+# Script with API keys (do not commit)
+configure-all-5-mcps.sh