Updating webapp test procedure

dev/tests/webapp.md

@@ -9,14 +9,9 @@ Doesn't show up at the time of writing:
 - outputs
 
 ## Not tested in the procedure
-- file menu
-- new project
-- in contact map subpanel: accuracy, export, hide guide lines
-- in influences subpanel: navigation, graph parameters
-- no check for missing test data in subpanels: 3 last constraints + polymers
-- in sim controls: pause if, all outputs, get trace
-- plot export
-- DIN export
+- in contact map subpanel: accuracy, hide guide lines
+- in influences subpanel: graph parameters are untested
+- in subpanels: 3 last constraints + polymers 
 
 
 ## Test procedure
@@ -38,32 +33,57 @@ Second level: what to check additionnally
 - delete those lines
 - click twice on toggle to check the opening/closure
 
+
 #### Right subpanel
 - Contact map is present, see that it changes when clicked on - interactive mode - show all states
+- export to svg and check the picture
 - Go to influences: is it populated?
 - Change rendering to graph, change accuracy to high, see that it changes
-- Change back to Tabular, click Track cursor. click on different rules in the editor to see that it changes in the subpanel
+- Change back to Tabular, click Track cursor. click on different rules in the editor to see that it changes in the subpanel; click on previous/next similarly
+- export to json and check that info is present in the file
 - Go to constraints subpanel, see that the two views domain are populated
 - Go to polymers, see that it shows > The size of biomolecular compounds is uniformly boundedG.
 
 #### Simulation
+- Add `[T] > 10` in `Pause if`, click on start, see that it showed "running" with events and time, and now Paused
+- Click on start, see the simulation doesn't run, delete contents of `Pause if`
 - Click on start, then on pause. See that it showed "running" with events and time, and now Paused
 - change to tab log, see that it shows lines with + Building initial simulation conditions...   and random seed used
 - Change to plot, click on the different plot axes options and see the changes
 - Continue/pause the simulation and see the plot changing, move the plot position with the slider
+- Export the plot to svg and open it
+- Same with csv
 - Change to DIN tab, check that a table is populated and that we can switch to the second table
+- Export to json and check the file 
 - Change to Snapshot tab, enter $SNAPSHOT in the Simulation perturbation and click intervention, see that the snapshot shows up
 - Click on kappa and change display to graph, play with the graph settings
 - Change back to kappa, continue/stop the simulation, make a new snapshot, and test to switch between snapshot
 - TODO: this currently doesn't work, adapt this when it does : - Go to outputs, run > $PRINT "time: ".[T]  and  > $PLOTENTRY   see that it shows up  
 - Go back to log tab and see the previous interventions show up
+- Click on `All outputs` in the simutation, check that the following files are present and not empty: log.txt, inputs.ka, flux.json, flux.html, data.csv
+
+#### Files
+- Hit clear to clear up the simulation
+- File>export and download the file
+- Reload the app, file> open, open back the file
+- File> new enter a name as `test.ka`, fill with the contents: https://www.di.ens.fr/~feret/teaching/2023-2024/MPRI.2.19/activities/causality/causality_slide_10.ka
+  - See the update of the contact map
+- Start, start again, pause. See if both file show up on the plot tab
+- Close abc.ka
 
 #### Stories
-- Copy/paste in the editor https://www.di.ens.fr/~feret/teaching/2023-2024/MPRI.2.19/activities/causality/causality_slide_10.ka
+- Click get trace at the bottom and check
+- If not done in previous section, Copy/paste in the editor https://www.di.ens.fr/~feret/teaching/2023-2024/MPRI.2.19/activities/causality/causality_slide_10.ka
 - Go to preferences, enable store trace, click Set
 - clear/start/pause the simulation
+- Click get trace at the bottom and check the file (TODO: reference?)
 - Go to the stories tab, click launch
 - See that the computation log show up, that a story graph appears on the right
 - Click on story_info log, see that it shows up
 - Change the story, see the log and graph changes
 - Test causal and strongly compressed stories the same way
+
+#### New project
+- Click new project, enter a name
+- Load a file e.g. abc.ka, run the simulation, check e.g. the plot
+- go back to project `default`, check editor, log and plot tabs didn't change