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1. Transfer-Learning-Vision Transfer-Learning-Vision Public

   Study on the performance of pre-trained models (VGG16, EfficientNetb0, ResNet50, ViT16) with weight fine tuning, as well as classical ML algorithms (Naive Bayes, Logistic Regression, Random Forest)…

   Jupyter Notebook 2 2

2. HepatitisC-ML-prediction-pipeline HepatitisC-ML-prediction-pipeline Public

   Pipeline for binary classification algorithm evaluation with nested cross validation and Bayesian hyperparameter tuning with optuna, particularly suited for unbalanced medical datasets.

   Jupyter Notebook

3. Neural-Networks-Adversarial-Examples Neural-Networks-Adversarial-Examples Public

   This repository contains code to solve different tasks related to building, training and creating adversarial examples for classification models on the MNIST and CIFAR10 datasets.

   Jupyter Notebook 1

4. BreastCancer-SingleCell BreastCancer-SingleCell Public

   Replication and extension of the single cell RNA-seq analysis paper "Single-cell RNA-seq enables comprehensive tumour and immune cell profiling in primary breast cancer"

   Jupyter Notebook 1

5. Disk-Based-Suffix-Tree Disk-Based-Suffix-Tree Public

   Replication & from scratch implementation of the paper: Phoophakdee, B., & Zaki, M. J. (2007, June). Genome-scale disk-based suffix tree indexing. In Proceedings of the 2007 ACM SIGMOD internationa…

   C++ 2

6. single-cell-ML-pipeline single-cell-ML-pipeline Public

   single-cell RNA seq Gaussian Mixture Model analysis pipeline. Accepts as input a single cell dataset (rows:cells x columns:gene expression) and provides their trajectories based on fitted Gaussian …

   Jupyter Notebook