Update TestDeepInterpolationDataStore.m

Update custom datastore test suite to use new 'enpacked' class name with +deepinterp root namespace
MATLAB-Community-Toolboxes-at-INCF · May 20, 2024 · 331e924 · 331e924
1 parent 7a7990d
commit 331e924
Showing 1 changed file with 41 additions and 41 deletions.
diff --git a/tests/TestDeepInterpolationDataStore.m b/tests/TestDeepInterpolationDataStore.m
@@ -18,7 +18,7 @@
 
 %% Test 01: Check if  matlab.io.Datastore is superclass.
 % A deepinterpolation datastore inherits from abstract Datastore
-dids = DeepInterpolationDataStore(TESTSTACKFULLFILE);
+dids = deepinterp.Datastore(TESTSTACKFULLFILE);
 assert(isa(dids,'matlab.io.Datastore'));
 
 %% Test 02: Call the read
@@ -30,7 +30,7 @@
 % The first frame that allows that is the 32nd!
 % The combination of training data and center frame is called a "set" here, and the
 % number of sets, following the logic above, is N-Frames - 62.
-dids = DeepInterpolationDataStore(TESTSTACKFULLFILE);
+dids = deepinterp.Datastore(TESTSTACKFULLFILE);
 t = read(dids);
 assert(iscell(t));
 assert(numel(t) == 2);
@@ -39,7 +39,7 @@
 
 %% Test 03: Call the read again
 % Standard sequential datastore behavior: advance to "second" center-frame
-dids = DeepInterpolationDataStore(TESTSTACKFULLFILE);
+dids = deepinterp.Datastore(TESTSTACKFULLFILE);
 read(dids);
 [t,info] = read(dids);
 assert(iscell(t));
@@ -50,7 +50,7 @@
 
 %% Test 04: Successfully read until no more data
 % The testdatastack should return 38 sets of training frames and reference frame
-dids = DeepInterpolationDataStore(TESTSTACKFULLFILE);
+dids = deepinterp.Datastore(TESTSTACKFULLFILE);
 count = 0;
 while(hasdata(dids))
     read(dids);
@@ -59,7 +59,7 @@
 assert(count == 38);
 
 %% Test 05: Call read when out of data
-dids = DeepInterpolationDataStore(TESTSTACKFULLFILE);
+dids = deepinterp.Datastore(TESTSTACKFULLFILE);
 try
     read(dids);
 catch ME
@@ -69,12 +69,12 @@
 %% Test 11: Call the readall method
 % Standard sequential datastore behavior: return all data in a nx2 Cell array, for
 % the test dataset n==38
-dids = DeepInterpolationDataStore(TESTSTACKFULLFILE);
+dids = deepinterp.Datastore(TESTSTACKFULLFILE);
 allt = readall(dids);
 assert(all(size(allt)==[38 2]));
 
 %% Test 12: Call the readall method when out of data
-dids = DeepInterpolationDataStore(TESTSTACKFULLFILE);
+dids = deepinterp.Datastore(TESTSTACKFULLFILE);
 while(hasdata(dids))
   read(dids);
 end
@@ -83,7 +83,7 @@
 
 %% Test 21: Call the reset method before any read
 % Reset to "first" frame (in fact, the 32nd frame in the stack...)
-dids = DeepInterpolationDataStore(TESTSTACKFULLFILE);
+dids = deepinterp.Datastore(TESTSTACKFULLFILE);
 reset(dids);
 [t,info] = read(dids);
 assert(iscell(t));
@@ -93,7 +93,7 @@
 assert(info == "set=1/centerframe=32");
 
 %% Test 22: Call the reset method after some reads
-dids = DeepInterpolationDataStore(TESTSTACKFULLFILE);
+dids = deepinterp.Datastore(TESTSTACKFULLFILE);
 read(dids);
 read(dids);
 read(dids);
@@ -106,7 +106,7 @@
 assert(info == "set=1/centerframe=32");
 
 %% Test 23: Call the reset method after readall
-dids = DeepInterpolationDataStore(TESTSTACKFULLFILE);
+dids = deepinterp.Datastore(TESTSTACKFULLFILE);
 read(dids);
 tall = readall(dids);
 reset(dids);
@@ -118,7 +118,7 @@
 assert(info == "set=1/centerframe=32");
 
 %% Test 24: Call the reset method when out of data
-dids = DeepInterpolationDataStore(TESTSTACKFULLFILE);
+dids = deepinterp.Datastore(TESTSTACKFULLFILE);
 while(hasdata(dids))
   read(dids);
 end
@@ -131,32 +131,32 @@
 assert(info == "set=1/centerframe=32");
 
 %% Test 31: Call the progress method before any reads
-dids = DeepInterpolationDataStore(TESTSTACKFULLFILE);
+dids = deepinterp.Datastore(TESTSTACKFULLFILE);
 p = progress(dids);
 assert(p==0);
 
 %% Test 32: Call the progress method after readall but before read.
-dids = DeepInterpolationDataStore(TESTSTACKFULLFILE);
+dids = deepinterp.Datastore(TESTSTACKFULLFILE);
 readall(dids);
 p = progress(dids);
 assert(p==0);
 
 %% Test 33: Call the progress method after read
-dids = DeepInterpolationDataStore(TESTSTACKFULLFILE);
+dids = deepinterp.Datastore(TESTSTACKFULLFILE);
 read(dids);
 p = progress(dids);
 assert((p-0.0270)<1e-4);
 
 %% Test 34: Call the progress method when out of data
-dids = DeepInterpolationDataStore(TESTSTACKFULLFILE);
+dids = deepinterp.Datastore(TESTSTACKFULLFILE);
 while(hasdata(dids))
   read(dids);
 end
 p = progress(dids);
 assert((p-1.0)<1e-4);
 
 %% Test 35: Progress produces correct output over all sets
-dids = DeepInterpolationDataStore(TESTSTACKFULLFILE);
+dids = deepinterp.Datastore(TESTSTACKFULLFILE);
 idx = 1;
 while(hasdata(dids))
   p(idx) = progress(dids);
@@ -168,7 +168,7 @@
 assert(all(diff(p) > 0), "progress must be monotonically increasing");
 
 %% Test 41: Preview methods returns first set
-dids = DeepInterpolationDataStore(TESTSTACKFULLFILE);
+dids = deepinterp.Datastore(TESTSTACKFULLFILE);
 t = preview(dids);
 assert(iscell(t));
 assert(numel(t) == 2);
@@ -177,7 +177,7 @@
 assert((t{1}(323,23,44)-138)<1e-4);
 
 %% Test 42: Preview methods returns first set after reads
-dids = DeepInterpolationDataStore(TESTSTACKFULLFILE);
+dids = deepinterp.Datastore(TESTSTACKFULLFILE);
 read(dids);
 read(dids);
 t = preview(dids);
@@ -188,7 +188,7 @@
 assert((t{1}(323,23,44)-138)<1e-4);
 
 %% Test 43: Preview methods returns first set after readall
-dids = DeepInterpolationDataStore(TESTSTACKFULLFILE);
+dids = deepinterp.Datastore(TESTSTACKFULLFILE);
 readall(dids);
 t = preview(dids);
 assert(iscell(t));
@@ -198,7 +198,7 @@
 assert((t{1}(323,23,44)-138)<1e-4);
 
 %% Test 44: Preview methods returns first set after reads and reset
-dids = DeepInterpolationDataStore(TESTSTACKFULLFILE);
+dids = deepinterp.Datastore(TESTSTACKFULLFILE);
 read(dids);
 read(dids);
 reset(dids);
@@ -210,7 +210,7 @@
 assert((t{1}(323,23,44)-138)<1e-4);
 
 %% Test 45: Preview methods returns first set when out of data
-dids = DeepInterpolationDataStore(TESTSTACKFULLFILE);
+dids = deepinterp.Datastore(TESTSTACKFULLFILE);
 while hasdata(dids)
     read(dids);
 end
@@ -222,7 +222,7 @@
 assert((t{1}(323,23,44)-138)<1e-4);
 
 %% Test 46: Read after preview is from correct location
-dids = DeepInterpolationDataStore(TESTSTACKFULLFILE);
+dids = deepinterp.Datastore(TESTSTACKFULLFILE);
 read(dids);
 read(dids);
 preview(dids);
@@ -234,13 +234,13 @@
 assert(info == "set=3/centerframe=34");
 
 %% Test 47: Readall after preview works correctly
-dids = DeepInterpolationDataStore(TESTSTACKFULLFILE);
+dids = deepinterp.Datastore(TESTSTACKFULLFILE);
 preview(dids);
 allt = readall(dids);
 assert(all(size(allt)==[38 2]));
 
 %% Test 48: Hasdata works correctly after preview
-dids = DeepInterpolationDataStore(TESTSTACKFULLFILE);
+dids = deepinterp.Datastore(TESTSTACKFULLFILE);
 read(dids);
 preview(dids);
 assert(hasdata(dids));
@@ -249,22 +249,22 @@
 % A partition of the deepinterpolation datastore is merely pointing to a different
 % startframe and has a smaller number of available sets. All the other behaviors are
 % derived from that
-dids = DeepInterpolationDataStore(TESTSTACKFULLFILE);
+dids = deepinterp.Datastore(TESTSTACKFULLFILE);
 subds = partition(dids,10,7);
 assert(isa(subds,'matlab.io.Datastore'));
 
 %% Test 51: Call Partition, check if the partition has correct properties
-dids = DeepInterpolationDataStore(TESTSTACKFULLFILE);
+dids = deepinterp.Datastore(TESTSTACKFULLFILE);
 subds = partition(dids,10,7);
 assert(isequal(properties(dids),properties(subds)));
 
 %% Test 52: Call Partition, check if the partition has correct methods
-dids = DeepInterpolationDataStore(TESTSTACKFULLFILE);
+dids = deepinterp.Datastore(TESTSTACKFULLFILE);
 subds = partition(dids,10,7);
 assert(isequal(methods(dids),methods(subds)));
 
 %% Test 53: Call Partition, successfully read from a partition
-dids = DeepInterpolationDataStore(TESTSTACKFULLFILE);
+dids = deepinterp.Datastore(TESTSTACKFULLFILE);
 subds = partition(dids,10,7);
 [t,info] = read(subds);
 assert(iscell(t));
@@ -274,14 +274,14 @@
 assert(info == "set=1/centerframe=56");
 
 %% Test 54: Call last Partition, read all data
-dids = DeepInterpolationDataStore(TESTSTACKFULLFILE);
+dids = deepinterp.Datastore(TESTSTACKFULLFILE);
 subds = partition(dids,13,13);
 while hasdata(subds)
     read(subds);
 end
 
 %% Test 55: Call Partition, check that total number of sets/frames is correct
-dids = DeepInterpolationDataStore(TESTSTACKFULLFILE);
+dids = deepinterp.Datastore(TESTSTACKFULLFILE);
 partsets = 0;
 for iii = 1:10
     subds = partition(dids,10,iii);
@@ -290,15 +290,15 @@
 assert(partsets-38 < 1e-4);
 
 %% Test 56: Call partition with partition=1 and index=1 and validate
-dids = DeepInterpolationDataStore(TESTSTACKFULLFILE);
+dids = deepinterp.Datastore(TESTSTACKFULLFILE);
 subds = partition(dids,1,1);
 assert(isequal(properties(dids),properties(subds)));
 assert(isequal(methods(dids),methods(subds)));
 assert(isequaln(read(subds),read(dids)));
 assert(isequaln(preview(subds),preview(dids)));
 
 %% Test 57: Partition a partition again and validate
-dids = DeepInterpolationDataStore(TESTSTACKFULLFILE);
+dids = deepinterp.Datastore(TESTSTACKFULLFILE);
 subds = partition(dids,2,2);
 subsubds = partition(subds,2,2);
 [t,info] = read(subsubds);
@@ -309,7 +309,7 @@
 assert(info == "set=1/centerframe=61");
 
 %% Test 58: Progress is working correctly in partitions
-dids = DeepInterpolationDataStore(TESTSTACKFULLFILE);
+dids = deepinterp.Datastore(TESTSTACKFULLFILE);
 subds = partition(dids,2,2);
 idx = 1;
 clear p
@@ -327,7 +327,7 @@
 %% Test 60: Create a Subset of the datastore and validate
 % deepinterpolation datastore is subsettable, again this just assigns the correct
 % startframe and number of available sets, but points to the same file
-dids = DeepInterpolationDataStore(TESTSTACKFULLFILE);
+dids = deepinterp.Datastore(TESTSTACKFULLFILE);
 subds = subset(dids,5:20);
 [t,info]=read(subds);
 assert(iscell(t));
@@ -337,7 +337,7 @@
 assert(info == "set=1/centerframe=36");
 
 %% Test 61: Progress is working correctly in subsets
-dids = DeepInterpolationDataStore(TESTSTACKFULLFILE);
+dids = deepinterp.Datastore(TESTSTACKFULLFILE);
 subds = subset(dids,5:10);
 idx = 1;
 clear p
@@ -354,27 +354,27 @@
 
 %% Test 71: Fail on wrong image size
 try
-    dids = DeepInterpolationDataStore(WRONGSIZETESTSTACKFULLFILE); %#ok<NASGU>
+    dids = deepinterp.Datastore(WRONGSIZETESTSTACKFULLFILE); %#ok<NASGU>
 catch EM
     assert(strcmp(EM.message,'Actual frame size is not equal to specified outputFrameSize'),"Fail on wrong tiff size");
 end
 
 %% Test 72: Read data with automatic resize
 options.doAutoResize = true;
-dids = DeepInterpolationDataStore(WRONGSIZETESTSTACKFULLFILE, options);
+dids = deepinterp.Datastore(WRONGSIZETESTSTACKFULLFILE, options);
 t = read(dids);
 assert(iscell(t));
 assert(numel(t) == 2);
 assert(all((size(t{1})==[512 512 60])));
 assert(all((size(t{2})==[512 512])));
 
 %% Test 81: Shuffling returns randomized datastore without error
-dids = DeepInterpolationDataStore(TESTSTACKFULLFILE);
+dids = deepinterp.Datastore(TESTSTACKFULLFILE);
 shds = shuffle(dids);
 assert(isa(shds,'matlab.io.Datastore'));
 
 %% Test 82: can read sequentially from shuffled datastore
-dids = DeepInterpolationDataStore(TESTSTACKFULLFILE);
+dids = deepinterp.Datastore(TESTSTACKFULLFILE);
 shds = shuffle(dids);
 count = 0;
 while(hasdata(shds))
@@ -384,7 +384,7 @@
 assert(count == 38);
 
 %% Test 83: can read all from shuffled datastore
-dids = DeepInterpolationDataStore(TESTSTACKFULLFILE);
+dids = deepinterp.Datastore(TESTSTACKFULLFILE);
 shds = shuffle(dids);
 allt = readall(shds);
-assert(all(size(allt)==[38 2]));
+assert(all(size(allt)==[38 2]));