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gc_nnunet_pancreas/meta.json - updated references to TCIA evaluation data #106

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LennyN95 merged 1 commit into from
Feb 17, 2025
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gc_nnunet_pancreas/meta.json - updated references to TCIA evaluation data #106

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10 changes: 7 additions & 3 deletions models/gc_nnunet_pancreas/meta.json
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Expand Up @@ -114,15 +114,19 @@
},
"evaluation": {
"title": "Evaluation Data",
"text": "This framework was tested in an independent, external cohort consisting of two publicly available datasets of respectively 281 and 80 patients each. The Medical Segmentation Decathlon pancreas dataset (training portion) [1] consisting of 281 patients with pancreatic malignancies (including lesions in the head, neck, body, and tail of the pancreas) and voxel-level annotations for the pancreas and lesion. The Cancer Imaging Archive dataset from the US National Institutes of Health Clinical Center [2], containing 80 patients with normal pancreas and respective voxel-level annotations.",
"text": "This framework was tested in an independent, external cohort consisting of two publicly available datasets of respectively 281 and 80 patients each. The Medical Segmentation Decathlon pancreas dataset (training portion) [1] consisting of 281 patients with pancreatic malignancies (including lesions in the head, neck, body, and tail of the pancreas) and voxel-level annotations for the pancreas and lesion. The Cancer Imaging Archive (TCIA) dataset from the US National Institutes of Health Clinical Center [2], contains 82 patients with normal pancreas and respective voxel-level annotations. A link to the 80 TCIA patient cases used for the evaluation of this model can be found here [3].",
"references": [
{
"label": "The Medical Segmentation Decathlon pancreas dataset (training portion)",
"uri": "http://medicaldecathlon.com/"
},
{
"label": "The Cancer Imaging Archive dataset from the US National Institutes of Health Clinical Center",
"uri": "https://wiki.cancerimagingarchive.net/display/Public/Pancreas-CT"
"label": "Roth, H., Farag, A., Turkbey, E. B., Lu, L., Liu, J., & Summers, R. M. (2016). Data From Pancreas-CT (Version 2) [Data set]. The Cancer Imaging Archive.",
"uri": "https://doi.org/10.7937/K9/TCIA.2016.tNB1kqBU"
},
{
"label": "Subset of 80/82 test cases from the TCIA Pancreas-CT Data set used for the evaluation",
"uri": "https://nbia.cancerimagingarchive.net/nbia-search/?saved-cart=nbia-977521177963571535"
}
],
"tables": []
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