fixed compat (MRIReco -> MRICoilSensitivities)

Project.toml

@@ -4,21 +4,21 @@ authors = ["Jakob Asslaender <[email protected]>"]
 version = "0.3.8"
 
 [deps]
-Polyester = "f517fe37-dbe3-4b94-8317-1923a5111588"
-RegularizedLeastSquares = "1e9c538a-f78c-5de5-8ffb-0b6dbe892d23"
+FFTW = "7a1cc6ca-52ef-59f5-83cd-3a7055c09341"
 LinearAlgebra = "37e2e46d-f89d-539d-b4ee-838fcccc9c8e"
-NFFT = "efe261a4-0d2b-5849-be55-fc731d526b0d"
 LinearOperators = "5c8ed15e-5a4c-59e4-a42b-c7e8811fb125"
+MRICoilSensitivities = "c57eb701-aafc-44a2-a53c-128049758959"
+NFFT = "efe261a4-0d2b-5849-be55-fc731d526b0d"
 NFFTTools = "7424e34d-94f7-41d6-98a0-85abaf1b6c91"
-MRIReco = "bdf86e05-2d2b-5731-a332-f3fe1f9e047f"
-FFTW = "7a1cc6ca-52ef-59f5-83cd-3a7055c09341"
+Polyester = "f517fe37-dbe3-4b94-8317-1923a5111588"
+RegularizedLeastSquares = "1e9c538a-f78c-5de5-8ffb-0b6dbe892d23"
 
 [compat]
-julia = "1.6"
-Polyester = "0.6"
-RegularizedLeastSquares = "0.8, 0.9"
-NFFT = "0.12.1, 0.13"
+FFTW = "1"
 LinearOperators = "2"
+MRICoilSensitivities = "0.1.1"
+NFFT = "0.12.1, 0.13"
 NFFTTools = "0.2"
-MRIReco = "0.4,0.5, 0.6, 0.7"
-FFTW = "1"
+Polyester = "0.6"
+RegularizedLeastSquares = "0.8, 0.9"
+julia = "1.6"

src/CoilMaps.jl

@@ -32,7 +32,7 @@ function calcCoilMaps(data::AbstractArray{Complex{T},3}, trj::AbstractVector{<:A
     kbp = kbp[m,:]
 
     @info "espirit: "
-    cmaps = @time MRIReco.espirit(kbp, img_shape, kernel_size, eigThresh_1=eigThresh_1, eigThresh_2=eigThresh_2, nmaps=nmaps)
+    cmaps = @time espirit(kbp, img_shape, kernel_size, eigThresh_1=eigThresh_1, eigThresh_2=eigThresh_2, nmaps=nmaps)
 
     cmaps = [cmaps[img_idx,ic,1] for ic=1:Ncoils]
     xbp   = [  xbp[img_idx,ic  ] for ic=1:Ncoils]

src/MRFingerprintingRecon.jl

@@ -5,7 +5,7 @@ using LinearAlgebra
 using FFTW
 using NFFT
 using NFFTTools
-import MRIReco
+using MRICoilSensitivities
 using LinearOperators
 
 export NFFTNormalOpBasisFunc, NFFTNormalOpBasisFuncLO, calcCoilMaps, calculateBackProjection, kooshball, kooshballGA