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aTrotier committed Dec 4, 2024
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10 changes: 5 additions & 5 deletions README.md
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# qMRIColors

[![Stable](https://img.shields.io/badge/docs-stable-blue.svg)](https://atrotier.github.io/qMRIColors.jl/stable/)
[![Dev](https://img.shields.io/badge/docs-dev-blue.svg)](https://atrotier.github.io/qMRIColors.jl/dev/)
[![Build Status](https://github.com/atrotier/qMRIColors.jl/actions/workflows/CI.yml/badge.svg?branch=main)](https://github.com/atrotier/qMRIColors.jl/actions/workflows/CI.yml?query=branch%3Amain)
[![Coverage](https://codecov.io/gh/atrotier/qMRIColors.jl/branch/main/graph/badge.svg)](https://codecov.io/gh/atrotier/qMRIColors.jl)
[![Stable](https://img.shields.io/badge/docs-stable-blue.svg)](https://magneticresonanceimaging.github.io/qMRIColors.jl/stable/)
[![Dev](https://img.shields.io/badge/docs-dev-blue.svg)](https://magneticresonanceimaging.github.io/qMRIColors.jl/dev/)
[![Build Status](https://github.com/magneticresonanceimaging/qMRIColors.jl/actions/workflows/CI.yml/badge.svg?branch=main)](https://github.com/magneticresonanceimaging/qMRIColors.jl/actions/workflows/CI.yml?query=branch%3Amain)
[![Coverage](https://codecov.io/gh/magneticresonanceimaging/qMRIColors.jl/branch/main/graph/badge.svg)](https://codecov.io/gh/magneticresonanceimaging/qMRIColors.jl)


Julia package of https://github.com/mfuderer/colorResources
Expand All @@ -25,7 +25,7 @@ cmap,imClip = relaxationColorMap("T1",x,loLev,upLev)
VIEW(imClip,c=cmap,clim=(loLev,upLev))
```
> [!IMPORTANT]
> <p>In the above, "VIEW" refers to your favorite viewing software (CairoMakie, Plots, PyPlot, ...) : [see example](https://atrotier.github.io/qMRIColors.jl/dev/example/)</p>
> <p>In the above, "VIEW" refers to your favorite viewing software (CairoMakie, Plots, PyPlot, ...) : [see example](https://magneticresonanceimaging.github.io/qMRIColors.jl/dev/example/)</p>
<p>The relaxationColorMap() function selects the appropriate color-map (in this case, Lipari for T1) and applies logarithm-processing on that color map. The resulting colormap is returned.</p>
<p>The "imclip" image should retain the distinction between the "invalid" value of 0 (which is to be displayed as black) and "valid" values that are below loLev (these should be shown in a dark shade of blue). Depending on the calibration of your screen, you may or may not see that distinction.</p>
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4 changes: 2 additions & 2 deletions docs/make.jl
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Expand Up @@ -8,7 +8,7 @@ makedocs(;
authors="aTrotier <[email protected]> and contributors",
sitename="qMRIColors.jl",
format=Documenter.HTML(;
canonical="https://atrotier.github.io/qMRIColors.jl",
canonical="https://magneticresonanceimaging.github.io/qMRIColors.jl",
edit_link="main",
assets=String[],
),
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)

deploydocs(;
repo="github.com/aTrotier/qMRIColors.jl",
repo="github.com/magneticresonanceimaging/qMRIColors.jl",
devbranch="main",
)
2 changes: 1 addition & 1 deletion docs/src/index.md
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CurrentModule = qMRIColors
```

Documentation for [qMRIColors](https://github.com/atrotier/qMRIColors.jl).
Documentation for [qMRIColors](https://github.com/magneticresonanceimaging/qMRIColors.jl).

Julia package of https://github.com/mfuderer/colorResources

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