PhysioFit 3.4.0

Changelog

• Added unit tests for all models
• Refactored some attribute names for more clarity
• Added more validation data (Berges et al. 2020, Peiro 2019, etc)
• Rebuilt logging system
• Added AIC criteria for model selection
• Added file selection when path_to_data in config file is wrong
• Changed how results are presented in GUI and added AIC
• other minor changes and bugfixes

PhysioFit 3.3.6

Changelog

• Bugfix: Fixed error where degradation model wouldn't launch

PhysioFit 3.3.5

Changelog

• Changed logging system for clearer logs
• fixed bug where in CLI mode summary didn't include all the experiments

PhysioFit 3.3.4

Changelog

• Fixed bug where during CLI launch the tool would iterate on experiment string instead of list of names

PhysioFit 3.3.3

Changelog

• Fixed security vulnerabilities in some dependencies
• Spaces in "experiments" column are now replace with underscores de facto

PhysioFit 3.3.2

Changelog

• Fixed bug where results were trying to be saved in read-only part of the galaxy file system on Workflow4Metabolomics.
• Minor changes in codebase for clarity: Io_handler objects now initialize working directory as wkdir and not home_path (only usefull for developers)

PhysioFit 3.3.1

Changelog

• Fixed bug where model selection wasn't been initialized in GUI

PhysioFit 3.3.0

Changelog

• added CLI functionality for W4M integration

PhysioFit 3.2.0

Changelog

• Fixed bug where model was not initialized when conf file is given
• Added a way to get models folder path in package mode
• Removed unused openpyxl dependency

PhysioFit 3.1.1

Changelog

• Changed openpyxl minimum version for conda integration & galaxy implementation