GitHub - ModelDBRepository/114337: Ionic mechanisms of bursting in CA3 pyramidal neurons (Xu and Clancy 2008)

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Ionic mechanisms of bursting in CA3 pyramidal neurons (Xu and Clancy 2008)

modeldb.science/114337

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Name		Name	Last commit message	Last commit date
Latest commit History 1 Commit
ca3_single_compartment.cpp		ca3_single_compartment.cpp
nr.h		nr.h
nrtypes.h		nrtypes.h
nrtypes_nr.h		nrtypes_nr.h
nrutil.h		nrutil.h
nrutil_nr.h		nrutil_nr.h
readme.html		readme.html
screenshot.jpg		screenshot.jpg

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<html><pre>

This is the readme for the model associated with the publication

Xu J, Clancy CE.  Ionic mechanisms of endogenous bursting in CA3
hippocampal pyramidal neurons: a model study.  PLoS ONE. 2008 Apr
30;3(4):e2056.

Usage:

(linux/unix) After extracting the archive compile the model with a
command like

g++ ca3_single_compartment.cpp -o run

Then run the file with a command like

./run > output.dat

After completion output.dat contains the data that produced the bottom
trace in figure 1 C.

<img src="./screenshot.jpg" alt="screenshot">

This data is also available in the first two columns of a file,
out_one, that was produced during the run.  The other columns contain
ionic currents as shown in figure 4.

These model files were submitted by Dr Colleen Clancy.
</pre></html>