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*.md linguist-detectable |
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# Submit a pull request | ||
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Thank you for submitting a pull request! To speed up the review process, please ensure that everything below | ||
is true: | ||
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1. You have followed the [contributing guidelines][1] | ||
2. You have added an appropriate title to the PR. | ||
3. Requested a review from the HPC Training team. | ||
4. Delete any Markdown comments, instructions or anything else outside the below divider section once you have finished your PR. | ||
5. Ensure that you are merging into the `dev` and not `main`. | ||
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Any questions should be directed to @MonashDeepNeuron/hpc-training. | ||
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--- | ||
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Replace any "X" below with information about your pull request. | ||
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## Details | ||
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<!-- Provide details about changes you have made --> | ||
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X | ||
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## Linked | ||
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<!-- Use a bullet list of linked or related issues, discussions, PR's and commits. This can be from this repository or external repositories. | ||
eg. | ||
- #1 (reference issue, PR or discussion by a hash number) | ||
- MonashDeepNeuron/EXAMPLE-REPO@<commit-hash> --> | ||
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- X | ||
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--- | ||
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[1]: https://github.com/MonashDeepNeuron/HPC-Training/blob/main/CONTRIBUTING.md |
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name: Deploy | ||
on: | ||
push: | ||
branches: | ||
- main | ||
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jobs: | ||
deploy: | ||
runs-on: ubuntu-latest | ||
steps: | ||
- uses: actions/checkout@v3 | ||
with: | ||
fetch-depth: 0 | ||
- name: Install mdbook | ||
run: | | ||
mkdir mdbook | ||
curl -sSL https://github.com/rust-lang/mdBook/releases/download/v0.4.14/mdbook-v0.4.14-x86_64-unknown-linux-gnu.tar.gz | tar -xz --directory=./mdbook | ||
echo `pwd`/mdbook >> $GITHUB_PATH | ||
- name: Deploy GitHub Pages | ||
run: | | ||
# This assumes your book is in the root of your repository. | ||
# Just add a `cd` here if you need to change to another directory. | ||
mdbook build | ||
git worktree add gh-pages | ||
git config user.name "Deploy from CI" | ||
git config user.email "" | ||
cd gh-pages | ||
# Delete the ref to avoid keeping history. | ||
git update-ref -d refs/heads/gh-pages | ||
rm -rf * | ||
mv ../book/* . | ||
git add . | ||
git commit -m "Deploy $GITHUB_SHA to gh-pages" | ||
git push --force --set-upstream origin gh-pages |
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name: CI | ||
on: [push, pull_request] | ||
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jobs: | ||
test: | ||
name: Test | ||
runs-on: ubuntu-latest | ||
steps: | ||
- uses: actions/checkout@master | ||
- name: Install Rust | ||
run: | | ||
rustup set profile minimal | ||
rustup toolchain install stable | ||
rustup default stable | ||
- name: Install mdbook | ||
run: | | ||
mkdir bin | ||
curl -sSL https://github.com/rust-lang/mdBook/releases/download/v0.4.14/mdbook-v0.4.14-x86_64-unknown-linux-gnu.tar.gz | tar -xz --directory=bin | ||
echo "$(pwd)/bin" >> $GITHUB_PATH | ||
- name: Run tests | ||
run: mdbook test |
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# Prerequisites | ||
*.d | ||
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# Compiled Object files | ||
*.slo | ||
*.lo | ||
*.o | ||
*.obj | ||
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# Precompiled Headers | ||
*.gch | ||
*.pch | ||
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# Compiled Dynamic libraries | ||
*.so | ||
*.dylib | ||
*.dll | ||
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# Fortran module files | ||
*.mod | ||
*.smod | ||
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# Compiled Static libraries | ||
*.lai | ||
*.la | ||
*.a | ||
*.lib | ||
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# Executables | ||
*.exe | ||
*.out | ||
*.app | ||
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# mdBook Output | ||
book | ||
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# MacOS Meta Files | ||
.DS_Store |
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<!DOCTYPE HTML> | ||
<html lang="en" class="sidebar-visible no-js light"> | ||
<head> | ||
<!-- Book generated using mdBook --> | ||
<meta charset="UTF-8"> | ||
<title></title> | ||
<base href="/"> | ||
<!-- Custom HTML head --> | ||
<meta content="text/html; charset=utf-8" http-equiv="Content-Type"> | ||
<meta name="description" content="Monash DeepNeuron's HPC Training Content"> | ||
<meta name="viewport" content="width=device-width, initial-scale=1"> | ||
<meta name="theme-color" content="#ffffff" /> | ||
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<link rel="icon" href="favicon.svg"> | ||
<link rel="shortcut icon" href="favicon.png"> | ||
<link rel="stylesheet" href="css/variables.css"> | ||
<link rel="stylesheet" href="css/general.css"> | ||
<link rel="stylesheet" href="css/chrome.css"> | ||
<link rel="stylesheet" href="css/print.css" media="print"> | ||
<!-- Fonts --> | ||
<link rel="stylesheet" href="FontAwesome/css/font-awesome.css"> | ||
<link rel="stylesheet" href="fonts/fonts.css"> | ||
<!-- Highlight.js Stylesheets --> | ||
<link rel="stylesheet" href="highlight.css"> | ||
<link rel="stylesheet" href="tomorrow-night.css"> | ||
<link rel="stylesheet" href="ayu-highlight.css"> | ||
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<!-- Custom theme stylesheets --> | ||
<!-- MathJax --> | ||
<script async type="text/javascript" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.1/MathJax.js?config=TeX-AMS-MML_HTMLorMML"></script> | ||
</head> | ||
<body> | ||
<!-- Provide site root to javascript --> | ||
<script type="text/javascript"> | ||
var path_to_root = ""; | ||
var default_theme = window.matchMedia("(prefers-color-scheme: dark)").matches ? "navy" : "light"; | ||
</script> | ||
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<!-- Work around some values being stored in localStorage wrapped in quotes --> | ||
<script type="text/javascript"> | ||
try { | ||
var theme = localStorage.getItem('mdbook-theme'); | ||
var sidebar = localStorage.getItem('mdbook-sidebar'); | ||
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if (theme.startsWith('"') && theme.endsWith('"')) { | ||
localStorage.setItem('mdbook-theme', theme.slice(1, theme.length - 1)); | ||
} | ||
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if (sidebar.startsWith('"') && sidebar.endsWith('"')) { | ||
localStorage.setItem('mdbook-sidebar', sidebar.slice(1, sidebar.length - 1)); | ||
} | ||
} catch (e) { } | ||
</script> | ||
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<!-- Set the theme before any content is loaded, prevents flash --> | ||
<script type="text/javascript"> | ||
var theme; | ||
try { theme = localStorage.getItem('mdbook-theme'); } catch(e) { } | ||
if (theme === null || theme === undefined) { theme = default_theme; } | ||
var html = document.querySelector('html'); | ||
html.classList.remove('no-js') | ||
html.classList.remove('light') | ||
html.classList.add(theme); | ||
html.classList.add('js'); | ||
</script> | ||
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<!-- Hide / unhide sidebar before it is displayed --> | ||
<script type="text/javascript"> | ||
var html = document.querySelector('html'); | ||
var sidebar = 'hidden'; | ||
if (document.body.clientWidth >= 1080) { | ||
try { sidebar = localStorage.getItem('mdbook-sidebar'); } catch(e) { } | ||
sidebar = sidebar || 'visible'; | ||
} | ||
html.classList.remove('sidebar-visible'); | ||
html.classList.add("sidebar-" + sidebar); | ||
</script> | ||
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<nav id="sidebar" class="sidebar" aria-label="Table of contents"> | ||
<div class="sidebar-scrollbox"> | ||
<ol class="chapter"><li class="chapter-item expanded affix "><a href="home.html">Welcome</a></li><li class="chapter-item expanded "><a href="chapter1/getting-started.html"><strong aria-hidden="true">1.</strong> Getting Started</a></li><li><ol class="section"><li class="chapter-item expanded "><a href="chapter1/github.html"><strong aria-hidden="true">1.1.</strong> GitHub</a></li><li class="chapter-item expanded "><a href="chapter1/windows.html"><strong aria-hidden="true">1.2.</strong> Windows</a></li><li class="chapter-item expanded "><a href="chapter1/mac.html"><strong aria-hidden="true">1.3.</strong> Mac</a></li><li class="chapter-item expanded "><a href="chapter1/linux.html"><strong aria-hidden="true">1.4.</strong> Linux</a></li><li class="chapter-item expanded "><a href="chapter1/wsl.html"><strong aria-hidden="true">1.5.</strong> WSL</a></li><li class="chapter-item expanded "><a href="chapter1/challenges.html"><strong aria-hidden="true">1.6.</strong> Challenges</a></li></ol></li><li class="chapter-item expanded "><a href="chapter2/intro-to-c.html"><strong aria-hidden="true">2.</strong> Brief Introduction to C</a></li><li><ol class="section"><li class="chapter-item expanded "><a href="chapter2/helloworld.html"><strong aria-hidden="true">2.1.</strong> Hello World</a></li><li class="chapter-item expanded "><a href="chapter2/compilation.html"><strong aria-hidden="true">2.2.</strong> Compilation</a></li><li class="chapter-item expanded "><a href="chapter2/vars.html"><strong aria-hidden="true">2.3.</strong> Types & Variables</a></li><li class="chapter-item expanded "><a href="chapter2/printing.html"><strong aria-hidden="true">2.4.</strong> Printing</a></li><li class="chapter-item expanded "><a href="chapter2/array.html"><strong aria-hidden="true">2.5.</strong> Arrays & Strings</a></li><li class="chapter-item expanded "><a href="chapter2/ctrl-flow.html"><strong aria-hidden="true">2.6.</strong> Control Flow</a></li><li class="chapter-item expanded "><a href="chapter2/loops.html"><strong aria-hidden="true">2.7.</strong> Loops</a></li><li class="chapter-item expanded "><a href="chapter2/functions.html"><strong aria-hidden="true">2.8.</strong> Functions</a></li><li class="chapter-item expanded "><a href="chapter2/pointers.html"><strong aria-hidden="true">2.9.</strong> Pointers</a></li><li class="chapter-item expanded "><a href="chapter2/memory.html"><strong aria-hidden="true">2.10.</strong> Dynamic Memory</a></li><li class="chapter-item expanded "><a href="chapter2/structs.html"><strong aria-hidden="true">2.11.</strong> Structures</a></li><li class="chapter-item expanded "><a href="chapter2/macros.html"><strong aria-hidden="true">2.12.</strong> Macros & The Preprocessor</a></li><li class="chapter-item expanded "><a href="chapter2/challenges.html"><strong aria-hidden="true">2.13.</strong> Challenges</a></li></ol></li><li class="chapter-item expanded "><a href="chapter3/chapter3.html"><strong aria-hidden="true">3.</strong> M3</a></li><li><ol class="section"><li class="chapter-item expanded "><a href="chapter3/start.html"><strong aria-hidden="true">3.1.</strong> Getting Started</a></li><li class="chapter-item expanded "><a href="chapter3/login.html"><strong aria-hidden="true">3.2.</strong> Logging In</a></li><li class="chapter-item expanded "><a href="chapter3/linux-cmds.html"><strong aria-hidden="true">3.3.</strong> Linux Commands</a></li><li class="chapter-item expanded "><a href="chapter3/shared-fs.html"><strong aria-hidden="true">3.4.</strong> M3's Shared Filesystem</a></li><li class="chapter-item expanded "><a href="chapter3/software-tooling.html"><strong aria-hidden="true">3.5.</strong> Software and Tooling</a></li><li class="chapter-item expanded "><a href="chapter3/bash.html"><strong aria-hidden="true">3.6.</strong> Bash Scripts</a></li><li class="chapter-item expanded "><a href="chapter3/slurm.html"><strong aria-hidden="true">3.7.</strong> Job batching & SLURM</a></li><li class="chapter-item expanded "><a href="chapter3/strudel.html"><strong aria-hidden="true">3.8.</strong> Strudel</a></li><li class="chapter-item expanded "><a href="chapter3/challenges.html"><strong aria-hidden="true">3.9.</strong> Challenges</a></li></ol></li><li class="chapter-item expanded "><a href="chapter4/chapter4.html"><strong aria-hidden="true">4.</strong> Parallel Computing</a></li><li><ol class="section"><li class="chapter-item expanded "><a href="chapter4/parallel-computing.html"><strong aria-hidden="true">4.1.</strong> What is Parallel Computing?</a></li><li class="chapter-item expanded "><a href="chapter4/multithreading.html"><strong aria-hidden="true">4.2.</strong> Multithreading</a></li><li class="chapter-item expanded "><a href="chapter4/openmp.html"><strong aria-hidden="true">4.3.</strong> OpenMP</a></li><li class="chapter-item expanded "><a href="chapter4/challenges.html"><strong aria-hidden="true">4.4.</strong> Challenges</a></li></ol></li><li class="chapter-item expanded "><a href="chapter5/chapter5.html"><strong aria-hidden="true">5.</strong> Distributed Computing</a></li><li><ol class="section"><li class="chapter-item expanded "><a href="chapter5/parallel-refresher.html"><strong aria-hidden="true">5.1.</strong> Refresher on Parallelism</a></li><li class="chapter-item expanded "><a href="chapter5/distributed-computing.html"><strong aria-hidden="true">5.2.</strong> What is Distributed Computing</a></li><li class="chapter-item expanded "><a href="chapter5/message-passing.html"><strong aria-hidden="true">5.3.</strong> Message Passing</a></li><li class="chapter-item expanded "><a href="chapter5/openmpi.html"><strong aria-hidden="true">5.4.</strong> OpenMPI</a></li><li class="chapter-item expanded "><a href="chapter5/challenges.html"><strong aria-hidden="true">5.5.</strong> Challenges</a></li></ol></li><li class="chapter-item expanded "><a href="acknowledgements.html">Acknowledgements</a></li></ol> | ||
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