Skip to content
@NCI-GDC

Genomic Data Commons

Pinned Loading

  1. gdc-workflow-overview gdc-workflow-overview Public

    Overview of GDC Harmonization Workflows

    27 9

  2. gdc-client gdc-client Public

    GDC Data Transfer Tool

    Python 147 40

  3. gdcdatamodel gdcdatamodel Public

    Translation layer between the GDC Data Dictionary and psqlgraph

    Python 28 3

  4. gdcdictionary gdcdictionary Public

    Data dictionary for the GDC

    Python 52 37

  5. psqlgraph psqlgraph Public

    Library for graph-like storage in postgresql using sqlalchemy

    Python 22 6

Repositories

Showing 10 of 84 repositories
  • gdc-frontend-framework Public
    NCI-GDC/gdc-frontend-framework’s past year of commit activity
    TypeScript 11 Apache-2.0 0 0 9 Updated Mar 13, 2025
  • gdc-docs Public Forked from NCIP/gdc-docs

    Official repository for GDC User Guides in Markdown format

    NCI-GDC/gdc-docs’s past year of commit activity
    JavaScript 60 Apache-2.0 44 0 18 Updated Mar 13, 2025
  • fastqc_to_json Public
    NCI-GDC/fastqc_to_json’s past year of commit activity
    Python 0 Apache-2.0 1 0 1 Updated Mar 13, 2025
  • indexd Public Forked from uc-cdis/indexd

    Index service server

    NCI-GDC/indexd’s past year of commit activity
    Python 3 Apache-2.0 20 0 13 Updated Mar 13, 2025
  • fastqc_db Public
    NCI-GDC/fastqc_db’s past year of commit activity
    Python 0 Apache-2.0 1 0 1 Updated Mar 13, 2025
  • gdc-dnaseq-cwl Public

    CWL for GDC DNASeq workflows

    NCI-GDC/gdc-dnaseq-cwl’s past year of commit activity
    Common Workflow Language 22 Apache-2.0 14 0 3 Updated Mar 13, 2025
  • fastq_cleaner Public

    FASTQ Vendor Failed Reads Removal

    NCI-GDC/fastq_cleaner’s past year of commit activity
    C++ 0 Apache-2.0 0 1 1 Updated Mar 13, 2025
  • gdc-rnaseq-cwl Public

    GDC RNA-Seq STAR 2-Pass Workflow

    NCI-GDC/gdc-rnaseq-cwl’s past year of commit activity
    Common Workflow Language 2 Apache-2.0 8 0 2 Updated Mar 13, 2025
  • psqlgraph Public

    Library for graph-like storage in postgresql using sqlalchemy

    NCI-GDC/psqlgraph’s past year of commit activity
    Python 22 Apache-2.0 6 5 7 Updated Mar 12, 2025
  • vep-tool Public

    GDC VEP Plugins

    NCI-GDC/vep-tool’s past year of commit activity
    Perl 0 Apache-2.0 1 0 2 Updated Mar 10, 2025
View all repositories

Top languages

Loading…

Most used topics

Loading…