Initial commit

.github/workflows/generate_api.yaml

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+name: Generate API
+
+on: push
+
+jobs:
+  generate-api:
+    runs-on: ubuntu-latest
+    env:
+      LIB_NAME: ${{ secrets.LIB_NAME }}
+    steps:
+      - name: Checkout
+        uses: actions/checkout@v2
+
+      - name: Setup Python
+        uses: actions/setup-python@v2
+        with:
+          python-version: 3.9
+
+      - name: Install sdRDM
+        run: python3 -m pip install git+https://github.com/JR-1991/software-driven-rdm.git@20-lowest-level-elements-in-xml-cannot-have-attributes-and-content
+
+      - name: Generate API
+        env:
+          URL: ${{github.repositoryUrl}}
+          COMMIT: ${{github.sha}}
+        run: sdrdm generate --path ./specifications/ --out . --name "$LIB_NAME" --url "$URL" --commit "$COMMIT"
+
+      - name: Push source code
+        run: |
+          if [[ `git status --porcelain` ]]; then
+            git add "$LIB_NAME"
+            git config --global user.name 'sdRDM Bot'
+            git config --global user.email '[email protected]'
+            git commit -am "API update"
+            git push
+          else
+            echo "Nothing changed!"
+          fi

.vscode/settings.json

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+{
+    "[python]": {
+        "editor.defaultFormatter": "ms-python.black-formatter"
+    },
+    "python.formatting.provider": "none"
+}

links/enzymeml.toml

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+__model__ = "NMRpy"
+
+[__sources__]
+EnzymeMLDocument = "https://github.com/EnzymeML/enzymeml-specifications.git@markdown-parser-refactor"
+
+[NMRpy]
+datetime_created = "EnzymeMLDocument.created"
+datetime_modified = "EnzymeMLDocument.modified"
+
+[experiment]
+name = "EnzymeMLDocument.name"
+
+[citation]
+doi = "EnzymeMLDocument.doi"
+
+["citation.authors"]
+last_name = "EnzymeMLDocument.creators.given_name"
+first_name = "EnzymeMLDocument.creators.family_name"
+email = "EnzymeMLDocument.creators.mail"
+
+["citation.related_publications"]
+doi = "EnzymeMLDocument.url"