remove all references to packages

index.Rmd

@@ -37,43 +37,43 @@ r.dir <- here::here("R")
 gis.dir <- here::here("gis")
 data.dir <- here::here("data")
 #Plotting and data libraries
-remotes::install_github("noaa-edab/ecodata")
-remotes::install_github("noaa-edab/stocksmart")
-remotes::install_github("thomasp85/patchwork")
-#remotes::install_github("andybeet/arfit")
-
-library(ggplot2)
-#library(formatR)
-#library(magrittr)
-library(dplyr)
-library(tidyr)
-library(ecodata)
-library(here)
-library(kableExtra)
-library(ggrepel)
-#library(stringr)
-library(patchwork)
-library(heatwaveR)
-library(gridExtra)
-library(vegan)
-library(grid)
-library(rpart)
-library(knitr)
-library(rmarkdown)
-library(readr)
-library(RColorBrewer)
-library(DT)
-library(AICcmodavg)
-
-library(plyr)
-library(cowplot)
-#library(plotly)
-#GIS libraries
-library(sf)
-#library(rgdal)
-#library(raster)
-library(marmap)
-library(ggspatial)
+# remotes::install_github("noaa-edab/ecodata")
+# remotes::install_github("noaa-edab/stocksmart")
+# remotes::install_github("thomasp85/patchwork")
+# #remotes::install_github("andybeet/arfit")
+# 
+# library(ggplot2)
+# #library(formatR)
+# #library(magrittr)
+# library(dplyr)
+# library(tidyr)
+# library(ecodata)
+# library(here)
+# library(kableExtra)
+# library(ggrepel)
+# #library(stringr)
+# library(patchwork)
+# library(heatwaveR)
+# library(gridExtra)
+# library(vegan)
+# library(grid)
+# library(rpart)
+# library(knitr)
+# library(rmarkdown)
+# library(readr)
+# library(RColorBrewer)
+# library(DT)
+# library(AICcmodavg)
+# 
+# library(plyr)
+# library(cowplot)
+# #library(plotly)
+# #GIS libraries
+# library(sf)
+# #library(rgdal)
+# #library(raster)
+# library(marmap)
+# library(ggspatial)
 
 
 #Time series constants