Script to run cycling DA using JEDI in cube sphere space, and offline Noah-MP model in vector space.

Clara Draper, Nov, 2021.

History Apr, 2022. Draper: Moved to PSL repo, restructuring and renaming of repos.

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COMPILING and TESTING.

1. Fetch sub-modules.

git submodule update --init --recursive

2. Compile sub-modules.

2a.

cd vector2tile then follow instructions in README. cd ..

2b.

cd ufs-land-driver

git submodule update --init (if did not use --recursive flag above)

configure

select hera, load indicated modules

make

2c.

cd DA_update build_all.sh

3. Run the test.

in settings_cycle_test check WORKDIR and OUTDIR are OK create OUTDIR in submit_cycle.sh change #SBATCH --account=gsienkf to point to your own account.

do_submit_test.sh

Once completed:

check_test.sh

RUNNING YOUR OWN EXPERIMENTS

1. Prepare a settings file, using settings_template. Must fill in all variables, unless otherwise commented.

2. Set start and end dates in analdates.sh

3. Make sure there is a restart in your ICSDIR.

restart filename example:ufs_land_restart.2015-09-02_18-00-00.nc ICSDIR points to the experiment directory with the restart. If creating a new dircetory, the structure is: $ICSDIR/output/mem000/restarts/vector/ufs_land_restart.2015-09-02_18-00-00.nc

4. in submit_cycle.sh change #SBATCH --account=gsienkf to point to your own account.

5. Submit your job

do_submit_cycle.sh your-settings-filename

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build steps with cmake: jedi stack works ok on orion but need to follow up jedi stack on hera.

1. git clone -b feature/bundle-cmake https://github.com/jkbk2004/land-offline_workflow-1

2. cd land-offline_workflow-1/

3. git submodule update --init --recursive

4. mkdir build

5. source configures/machine.orion.intel

6. cd build/

7. ecbuild ..

8. make -j 1