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QuickGO link fix #2

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bj8th opened this issue Nov 5, 2019 · 1 comment
Open

QuickGO link fix #2

bj8th opened this issue Nov 5, 2019 · 1 comment

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@bj8th
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bj8th commented Nov 5, 2019

QuickGO API change.
see https://www.ebi.ac.uk/QuickGO/api/index.html for new API

@bj8th
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bj8th commented Nov 5, 2019

batch_get_GO_annotations() fixed.

get_GO_term()

  • version is not included when pulling with new API. return -1
  • is_a : pulling ancestors where link is is_a. previous API may have pulled only immmediate parents. current version pulls all is_a ancestors.

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