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Add REPRINT tutorial link
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sarah-haynes authored Jul 30, 2020
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Expand Up @@ -46,10 +46,11 @@ Download the latest version [here](https://github.com/nesvilab/philosopher/relea
- [Philosopher basics](https://github.com/Nesvilab/philosopher/wiki/Philosopher-Basics) - general usage information
- [Preparing protein databases](https://github.com/Nesvilab/philosopher/wiki/How-to-Prepare-a-Protein-Database) - download and format sequences
- [Simple data analysis](https://github.com/Nesvilab/philosopher/wiki/Simple-Data-Analysis) - basic step-by-step tutorial
- [Using pipeline for TMT analysis](https://github.com/Nesvilab/philosopher/wiki/Pipeline-mode-for-TMT-analysis) - pipeline a large data set
- [Using pipeline for TMT analysis](https://github.com/Nesvilab/philosopher/wiki/Pipeline-mode-for-TMT-analysis) - pipeline analysis of a large data set
- [Step-by-step TMT analysis](https://github.com/Nesvilab/philosopher/wiki/Step-by-step-TMT-analysis) - step-by-step tutorial for isobaric quantification of a small data set
- [Open search analysis](https://github.com/Nesvilab/philosopher/wiki/Open-Search-Analysis) - step-by-step tutorial for open searches
- [Step-by-step analysis with Comet](https://github.com/Nesvilab/philosopher/wiki/Step-by-step-analysis-with-Comet)
- [Step-by-step analysis with Comet](https://github.com/Nesvilab/philosopher/wiki/Step-by-step-analysis-with-Comet) - step-by-step tutorial with Comet search
- [Protein-protein interaction analysis](https://github.com/Nesvilab/philosopher/wiki/REPRINT-Analysis) - analyze AP-MS data for downstream use with REPRINT

## Documentation
See the [documentation](https://github.com/Nesvilab/philosopher/wiki/Home) for more details about the available commands.
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