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update ref genome data #30

update ref genome data

update ref genome data #30

Workflow file for this run

name: update ref genome data
on:
# Allows you to run this workflow manually from the Actions tab
workflow_dispatch:
# Allows you to run this workflow every Tuesday and Friday at 12:12 UTC
schedule:
- cron: '12 12 * * 2,5'
# Sets the GITHUB_TOKEN permissions to allow deployment to GitHub Pages
permissions:
contents: write
pages: write
id-token: write
# Allow one concurrent deployment
concurrency:
group: 'update-data'
cancel-in-progress: true
jobs:
deploy:
timeout-minutes: 60
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v3
- uses: actions/setup-node@v3
with:
node-version: 18
- name: Install dependencies
run: npm ci
- name: Build offline mode
env:
VITE_OFFLINE_VERSION: true
run: npm run build
- name: Push updated ref genome data and offline mode to master
run: |
zip -9 -r viralwasm-consensus-offline.zip dist/ run_website.py
git config --global user.name 'GitHub Actions'
git config --global user.email '[email protected]'
git add .
# Check for changes
if git diff-index --quiet HEAD --; then
# No changes
echo "No changes to commit"
else
# Changes detected
git commit -m "Add updated ref genome data and offline mode zip"
git push origin master
fi
- name: Build for github pages
run: npm run build
- name: Setup Pages
uses: actions/configure-pages@v3
- name: Upload artifact
uses: actions/upload-pages-artifact@v1
with:
# Upload dist repository
path: './dist'
- name: Deploy to GitHub Pages
id: deployment
uses: actions/deploy-pages@v1