attempt to fix workflow

.github/workflows/website.yml

@@ -40,13 +40,6 @@ jobs:
         run: npm install
       - name: Build
         run: npm run build
-      - name: Push dist to master branch
-        run: |
-          git config --global user.name 'GitHub Actions'
-          git config --global user.email '[email protected]'
-          git add .
-          git commit -m "Add dist folder"
-          git push origin master
       - name: Setup Pages
         uses: actions/configure-pages@v3
       - name: Upload artifact
@@ -56,4 +49,14 @@ jobs:
           path: './dist'
       - name: Deploy to GitHub Pages
         id: deployment
-        uses: actions/deploy-pages@v1
+        uses: actions/deploy-pages@v1
+      - name: Push offline mode to master
+        env: 
+          VITE_OFFLINE_VERSION: true
+        run: |  
+          npm run build
+          git config --global user.name 'GitHub Actions'
+          git config --global user.email '[email protected]'
+          git add .
+          git commit -m "Add dist folder"
+          git push origin master

.gitignore

@@ -22,4 +22,6 @@ dist-ssr
 *.sln
 *.sw?
 
-test/
+test/
+
+.env

README.md

@@ -1,5 +1,9 @@
 ## ViralWasm-Consensus 
 
-A client-side WebAssembly pipeline for viral consensus sequence calling. To run the pipeline locally without internet, download the **offline** version of ViralWasm-Consensus. To do so, download the latest release / repository (https://github.com/Niema-Lab/ViralWasm-Consensus/archive/master.zip) and run the following command:
+A client-side WebAssembly pipeline for viral consensus sequence calling. 
+
+Visit: https://niema-lab.github.io/ViralWasm-Consensus/ to run the pipeline.
+
+To run the pipeline locally without internet, download the **offline** version of ViralWasm-Consensus. To do so, download the latest release / repository (https://github.com/Niema-Lab/ViralWasm-Consensus/archive/master.zip) and run the following command:
 
 ```python3 run_website.py```

vite.config.js

@@ -1,11 +1,14 @@
-import { defineConfig } from 'vite'
+import { defineConfig, loadEnv } from 'vite'
 import react from '@vitejs/plugin-react-swc'
 
 // https://vitejs.dev/config/
-export default defineConfig({
-  base: '/',
-  plugins: [react()],
-  build: {
-    sourcemap: true,
-  }
+export default defineConfig(({ command, mode }) => {
+	const env = loadEnv(mode, process.cwd(), '')
+	return {
+		base: env.VITE_OFFLINE_VERSION === "true" ? '/' : '/ViralWasm-Consensus/',
+		plugins: [react()],
+		build: {
+			sourcemap: true,
+		}
+	}
 })