Tensorboard io

[Lilferrit]

TensorBoard summary writer now writes to a subdirectory of --output_dir, <output_dir>/tensorboard. The config option tb_summarywriter has been redefined to be a boolean, and if set to true the TensorBoard summary will be written to the output directory.

I am marking this PR as a draft until console-file-io get's merged into dev, as this branch is based on console-file-io and is dependent on changes introduced in that branch.

[Lilferrit]

Alternatively we could introduce a --tensorboard or similar command line option, and eliminate the tb_summarywriter config option entirely.

[codecov]

Codecov Report

Attention: Patch coverage is 83.33333% with 1 line in your changes missing coverage. Please review.

Project coverage is 94.40%. Comparing base (4cff0c8) to head (f9b0895).
Report is 1 commits behind head on dev.

Files with missing lines	Patch %	Lines
casanovo/denovo/model_runner.py	83.33%	1 Missing ⚠️

Additional details and impacted files

@@            Coverage Diff             @@
##              dev     #374      +/-   ##
==========================================
- Coverage   94.47%   94.40%   -0.07%     
==========================================
  Files          12       12              
  Lines        1067     1073       +6     
==========================================
+ Hits         1008     1013       +5     
- Misses         59       60       +1     

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[bittremieux]

Can be merged after #372 has been completed.

[bittremieux]

Alternatively we could introduce a --tensorboard or similar command line option, and eliminate the tb_summarywriter config option entirely.

No, the current solution is better. This is not a very important setting that we want to expose on the command line.