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…uctural MRI Adds rhino.generate_pseudo_mri() which scales a template MRI (default MNI152) to match a participant's head shape from EinScan digitisation points. Includes a new OPM preprocessing tutorial (doc/tutorials/0-2_opm_preprocessing.py).
Replaces the FLIRT-based pseudo-MRI generation with a simpler composable approach: scale_surfaces_to_headshape takes an existing surfaces directory and scales it to match headshape points via affine ICP. Uses pre-computed MNI152 surfaces by default, avoiding BET/FLIRT entirely.
Adds osl_dynamics.meeg.amm module implementing the AMM method (Tierney et al., 2024) for separating brain signals from environmental interference in OPM data. Integrated into the OPM tutorial as the first preprocessing step.
Remove OPM tutorial from git (file kept locally). Add links to external OPM and Canonical HMM tutorials on the documentation page.
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Closes: #414.
Changes:
meeg.rhinoto affine transform a template MRI to match headshape points.